Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5262 ATGGAGACTAAAATTAATTCCATTGGTGTTCATGGTTGGGCCGACACGAGATGGTTTGTCGTGTTCGCCTCTTTTTTAATCATGTCCGTTGCTGGAGCCACCTACATGTTTGGTCTATACTCCAACGACTTAAAAACAATACTTGGCTATGACCAAAGCACACTAAACCTCCTTAGTTTCTTCAAAGATTTTGGTGCCAACGTTGGTATTCTTGCCGGATTAGTCAATGAAGTATATCCACCTTGGGTAGTTCTAACCATTGGTGCTATTCTCAATTTCTTTGGTTACTTCATGATTTGGTTATCCGTAACCAAGAAAATAGCAACACCAAAAGTCTGGCAAATGTGTCTTTACATTTGCATTGGTGCTAACTCTCAGTCTTTCGCAAACACCGGTTCACTTGTTACCTGTGTGAAGAATTTCCCCGAGTCTCGCGGCGCTGTTTTGGGAGTTCTGAAAGCTATTTTCAGTTTCATCTCAAAGAAAGATCCAAAATGGTATGAAGAGTTGTTTCATCCACTGCAAGAGGTGAAGGATTATACAATTCTTCAAGCACTTTTCAGCATTGACATGTTGATACTCTTCGTGGCATGTATCTCCGGTGTTGGTGGAGCGTTAACAGCGATCGATAATCTTAACCAGATCGGAACATCGCTTCGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCATTAGTAAGTATTTGGAATTATCTCGGACGAGTTTTCTCAGGATTTGTTTCAGAACATGTTCTAACAAAGTACAAATTTCCTCGTCCTCTTATGCTTACTTTAACTCTCTTCATATCATGTGTTGGACATCTTTTGATAGCATTTGATGTTCCGAATGGTCTCTACGCAGCATCGGTGATTATTGGATTTTGTTTTGGTGCGCAATGGCCATTACTTTTCGCCATAATTTCAGAACTTTTTGGGCTTAAATATTATGCAACTTTGTATAATTTTGGAAATGTAGCAAGTCCTCTTGGGTTATATGTTCTTAATGTGATGGTCACTGGTTATTTGTATGACAAAGAAGGTACAAAGCAATTGGAAGCATTTGGACTAAAGAGAAAAGAAGGACAACAATTGAATTGTGTTGGCGTTGATTGTTTCAAATTATCTTTTATTATTATTACAACTGCAACTTTTTTTGGGTGCGATTGTCTCACTTACTTTAGTGGCGAGAACAAGAAAGTTTTACAAAGGTGA 1212 0.3837 METKINSIGVHGWADTRWFVVFASFLIMSVAGATYMFGLYSNDLKTILGYDQSTLNLLSFFKDFGANVGILAGLVNEVYPPWVVLTIGAILNFFGYFMIWLSVTKKIATPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGVLKAIFSFISKKDPKWYEELFHPLQEVKDYTILQALFSIDMLILFVACISGVGGALTAIDNLNQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHVLTKYKFPRPLMLTLTLFISCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGNVASPLGLYVLNVMVTGYLYDKEGTKQLEAFGLKRKEGQQLNCVGVDCFKLSFIIITTATFFGCDCLTYFSGENKKVLQR* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5262 403 SUPERFAMILY MFS general substrate transporter 17 347 IPR036259 -
Psa6g5262 403 CDD MFS_Mch1p_like 17 387 - -
Psa6g5262 403 Pfam Nodulin-like 17 196 IPR010658 -
Psa6g5262 403 Gene3D MFS general substrate transporter like domains 180 398 IPR036259 -
Psa6g5262 403 PANTHER MFS TRANSPORTER 158 387 - -
Psa6g5262 403 PANTHER MFS TRANSPORTER 15 155 - -
Psa6g5262 403 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 158 387 - -
Psa6g5262 403 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5262 Psa-Chr6 462579911 462581554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5262 162 386 Nodulin-like Gene Family AT2G39210 72.444 6.22e-110 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5262 - - dosa:Os12t0484600-01 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5262 6 462579911 462581554 Psa6g5262 6 462579911 462581554 ECH