Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5249 ATGGGTCTCATTCATCTCACAAAAAAATCAATCTTTTTCACTCTTGCAATACTCATTCCAATTATTACTACAAAACTCTTATCACCATCCATTGCTTGTGCCTCACTCATACTCTCATTAATATTATACATAAACTCAACTCATTCCAATTCAAACCACAAAAACCCTCCAACCCCTTTTTCTGTTCCTATATTTGGAAACTGGCTCCAAGTTGGAAATGATCTCAACCATCGCATTCTTGCATCCATGTCTCAAACATATGGACCACTTTTCCTCCTCAAACTCGGTTCCAAAAACCTAGTTGTTGTCTCTGATCCAAACCTCGCCACACAAGTTCTCCATTCACAAGGTGTCGAATTCGGCTCTCGTCCTCGTAACGTCGTCTTCGATATCTTCACCGGTAATGGACAAGACATGGTTTTCACAGTCTACGGAGATCACTGGCGCAAAATGCGAAGAATCATGACATTGCCGTTTTTCACTAACAAAGTTGTTCATAATTATAGTAACATGTGGGAACAAGAAATGGATTTGGTGGTGCAAGATCTTAAGGCTAATGAGATTGTTGGAAGTGAAGGGATTGTTATCAGAAAACGTCTTCAGTTGATGTTGTATAATATCATGTATAGAATGATGTTTGATTCCAAATTTGAGTCTCAAGAAGATCCTTTGTTTATTCAAGCTACAAGGTTTAACTCTGAGAGAAGCCGTTTGGCGCAGAGTTTTGAGTACAATTATGGAGATTTTATACCTTTGCTTAGGCCTTTCTTGAGAGGCTACCTTAACAAATGCAAAGACTTGCAAACTAGAAGACTTGCATTTTTCAACAGCTACTTCATTGAAAAGAGGAGAAAAATAATGGCAGAAAATGGGGAGAAGCATGAGATAAACTGTGCAATTGATCACATAATAGATGCTGAGATGAAAGGTGAAATAAGTGAAGAAAATGTGACATACATAGTCGAAAACATAAACGTTGCTGCAATAGAAACAACACTATGGTCAATGGAATGGGCAATAGCGGAGATAGTGAATAATCCAAGAGTCCAAACAAAAATTCGAGATGAGATATCAAAAGTGCTTAAAGGTGAACAAGTTACAGAATCAAACCTAAACCAGTTACCATATCTACAAGCAACATTGAAAGAGGTATTAAGATTGCACACACCGATTCCATTGCTAGTGCCTCACATGAACCTCGAAGAGGCCAAGCTAGGAGAGTACACAATTCCGAAAGAGAGTAAGGTAGTTGTGAATGCTTGGTGGCTTGCAAATAATCCATTATGGTGGGAGAAGCCGGAGGAGTTTAGGCCAGAGAGGTTTTTGGAAGAGGAGAATGGAACTGATGCAGTGGCTGGTGGAGGGAAAGTTGATTTCAGGTTTGTGCCATTTGGTGTTGGGAGAAGAAGTTGTCCTGGAATTATACTTGCATTGCCAATATTGGGATTGGTGGTTGCTAAGTTGGTGTCAAATTTTGAGATGAAGGGTTTGAATGGGATGAAGATTGATGTTAGTGAAAAAGGTGGACAATTTAGTTTGCATATTGCTAATCATTCAACTGTTTTGTTTCATCCAATTGATTAA 1584 0.3883 MGLIHLTKKSIFFTLAILIPIITTKLLSPSIACASLILSLILYINSTHSNSNHKNPPTPFSVPIFGNWLQVGNDLNHRILASMSQTYGPLFLLKLGSKNLVVVSDPNLATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEQEMDLVVQDLKANEIVGSEGIVIRKRLQLMLYNIMYRMMFDSKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNSYFIEKRRKIMAENGEKHEINCAIDHIIDAEMKGEISEENVTYIVENINVAAIETTLWSMEWAIAEIVNNPRVQTKIRDEISKVLKGEQVTESNLNQLPYLQATLKEVLRLHTPIPLLVPHMNLEEAKLGEYTIPKESKVVVNAWWLANNPLWWEKPEEFRPERFLEEENGTDAVAGGGKVDFRFVPFGVGRRSCPGIILALPILGLVVAKLVSNFEMKGLNGMKIDVSEKGGQFSLHIANHSTVLFHPID* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5249 527 PANTHER OS02G0467000 PROTEIN 7 526 - -
Psa6g5249 527 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 7 526 - -
Psa6g5249 527 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 SUPERFAMILY Cytochrome P450 56 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Psa6g5249 527 Pfam Cytochrome P450 56 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 Gene3D Cytochrome P450 45 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5249 527 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5249 Psa-Chr6 461814035 461816080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5249 65 525 Monolignol Biosynthesis Gene Families AT2G30490 64.655 0.0 629