Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5231 ATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCTGCTCTCATGGCCATTGCTATGCACATGGAGGGAAAGCGAGGAATTATCAAGTTTGTTGGCATAATTATTTTGCTAATTATAACTCAACATAAGTTTCATAGAAGAAATAATGCTGGTAATGCAGCTGCTGCCTTATGGCAAGATTGGGCTCCAAAAGCAAAGGTACTTCGTGACGGAAAATGGAGCGAAGAAGATGCTTCGGTATTGGTCCCTGGAGACATAGTTAGCATCAAGCTAGGGGACATCATTCCTGCCGACGCACGTCTCCTTGAAGGTGACCCTTTGAAGATTGATCAGTTATGTTTTTGCTGTTTGTACTTTAGTCTGCTCTTACGGAGAGTCACTCCTGTGACTAAACATCCCGGAGAAGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAAGTCGTAGTCATAGCAACTGGAGTTCACACATTTTTCGGAAAGGCAGCTCATCTCGTCGAAAACACAACACACGTTGGACATTTCCAACAGGTTTTGACATCTATTGGAAATTTCTGCATCTGTTCAATTGCTATTGGATTGATTATTGAAATCATGTTTTTGCAAAGGTGTTGGCAAGGATTTGGTTGTACTTATGGCTGCAAGAGCATCAGGATGGAGAACCAAGATGCAATTGATGCGCAATCGTTTCAAATGTTGGCAGACCAAAGGAGGAGCACGAGTTGGAATAAAAGAAGTTCATTTCCTTCGTTTAATCCAACTGATAAAGAACTGCCCTTACATACATTGATGGTGCTGGTAATAGCACAGGATTCTCAATCTTGCACAAACAAGGCAGAAATCGAACTGGAGGTTCATGCGATGATTGACAAGTTGCAGAACGTGGACTTCGTTCTCTTGGGATTGCAAGACAGGAAGTACCGGAGGGAAGTAAGGAAAGTGCAGGAGGACCATGGGAGTTTTGTTGGCTCTTCTCCCTCTTTTTGA 993 0.429 MWNPLSWVMEAAALMAIAMHMEGKRGIIKFVGIIILLIITQHKFHRRNNAGNAAAALWQDWAPKAKVLRDGKWSEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQLCFCCLYFSLLLRRVTPVTKHPGEGVYSGSTCKQGEIEVVVIATGVHTFFGKAAHLVENTTHVGHFQQVLTSIGNFCICSIAIGLIIEIMFLQRCWQGFGCTYGCKSIRMENQDAIDAQSFQMLADQRRSTSWNKRSSFPSFNPTDKELPLHTLMVLVIAQDSQSCTNKAEIELEVHAMIDKLQNVDFVLLGLQDRKYRREVRKVQEDHGSFVGSSPSF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5231 330 PANTHER PLASMA MEMBRANE ATPASE 217 303 - -
Psa6g5231 330 PANTHER PLASMA MEMBRANE ATPASE 1 203 - -
Psa6g5231 330 PANTHER CALCIUM-TRANSPORTING ATPASE 217 303 - -
Psa6g5231 330 PANTHER CALCIUM-TRANSPORTING ATPASE 1 203 - -
Psa6g5231 330 Pfam E1-E2 ATPase 62 205 - -
Psa6g5231 330 Gene3D - 28 205 - -
Psa6g5231 330 Gene3D - 63 155 - -
Psa6g5231 330 SUPERFAMILY Calcium ATPase, transduction domain A 63 168 IPR008250 -
Psa6g5231 330 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 203 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5231 Psa-Chr6 460223077 460225693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5231 1 203 Primary Pumps ATPases AT3G60330 70.874 6.09e-78 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5231 K01535 - gmx:100794938 267.314