Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5192 ATGCAACATGCAACAAACCCTGCAAAGACCAATTCATGCGCCTGTTATAATGTAGCAGAACCAGCAGAAAAACCATATAACAAAGTCGTATCATGGTTTCACTTCAGTTCATACATCAGACCTGCCACGCCAGTTCAACAACAATATTTCAAAACCTGCAAGAAAAAACCAAAACAGCAAACACCAGAAGTTAAGCCAAGTGTTGTCATGATTGAGGATCACATATTTGAAGAATATGAAGAGCCTCCCGTCTTTGAAAAAAAGAGTATATTTGTGGTACAATCTAATGGGATAAATGAGCAGCGGGCACAATATGATAGTTGCTTAAGATGGAGGAAGTTACCAGTTGATGTACTTATTCCCTCTAAGTGGACTTGTATGGAGAATTTTTGGGATCAAAGCAGGTGTTCATGCACTGCTCCCAATGAATTGAACCCAAGGGAACTGGATAATCTTTGGAGAATGAACAAGGAATTCAAGAAACAAAGACTTACAGCGGCAAGCCAGAGGCCAGCTCTGGAACGTGAAGATCTTGATGCTTTGACCAATGTTGCAGTACTTGGAGATGATACAAGTGACTCTGGCAGGACACCAGTCGTGACCACTACAAAACACCCTCCTCATAGACCTGGGTGCTCCTGTATTGTCTGTATCCAGCCACCAAGTGGGAAGGGCAAACACAAACCTTCATGCACCTGTAACGTGTGCTTGACAGTTAAACCTCAGTTTAAAACCCTGCTATGA 744 0.4247 MQHATNPAKTNSCACYNVAEPAEKPYNKVVSWFHFSSYIRPATPVQQQYFKTCKKKPKQQTPEVKPSVVMIEDHIFEEYEEPPVFEKKSIFVVQSNGINEQRAQYDSCLRWRKLPVDVLIPSKWTCMENFWDQSRCSCTAPNELNPRELDNLWRMNKEFKKQRLTAASQRPALEREDLDALTNVAVLGDDTSDSGRTPVVTTTKHPPHRPGCSCIVCIQPPSGKGKHKPSCTCNVCLTVKPQFKTLL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5192 247 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 61 247 - -
Psa6g5192 247 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 61 247 - -
Psa6g5192 247 ProSiteProfiles Zinc finger CW-type profile. 96 146 IPR011124 GO:0008270
Psa6g5192 247 Pfam CW-type Zinc Finger 106 143 IPR011124 GO:0008270
Psa6g5192 247 Gene3D - 101 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5192 Psa-Chr6 447104842 447105585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5192 56 247 B3 DNA Binding Superfamily AT4G32010 52.850 4.93e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5192 - - gmx:100778833 314.309