Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5164 ATGTTTTCACCCTCACATCGTCTCCTCTTTTTTTCATTCTCCATTATACTTCAACTCCTACTAGCATCAGCTAACTGTCCATCTTCCTTTACCTGCGGATATCTCGGACCAATCTCATTTCCTTTCACAACCACACAACACCCAAACTGTGGCATGTTGATCATACACGGTTGCGACGACTCCGAACCACAATCCAAAAAAACCATTCAAAATAACAAAACATGGTTCGATATCACCAAAATCGATCCCTTCACAATAACAATTAGAGACGACGATCTCCACGACATACTGCTAAAAAGAAGTTGCGACATTCTAAACTACAACTCTAAGTTTACTGTCAACACACCTCTGGTTTCATCTCGCCTGGCCAACTACATCACCGTTTACGGTTGCAACAGCAGCAACGCAGTCGATCTTCAACAGTACTATTCAGTTTCTAATTCTACTTCCATCTGTAGAAACGAGAACAGTTCTTTGAATGGTGTTTCTGATTCGGATATCAAGAGTAATAAAGCTATTGTGGTTATAACTGATTCTGTTCCTGCGAATTCAAATCATCTCAGAGGATGTTCAAGGGCTATGATTCCAACGAGGTTTGAGGTTAGAAGTCTTGATCCTGATGAACTTTTTAACTCGTTAAGTGATGAAATTGCTATCAAATTACAAGTTTCTCAGAATTGTTCTACCTGTCATGATCTTGATGGAGGTCAATGCCGTCTTGATAACTACGGCCAGTTTTATTGTCAACAAGGGAAATCTAAAAAGACTCATCTAATGATAATGATAGCAGTTGCATCTTCCACTGGAGCACTTGTAGTTCTAGCAATTTTGGCTTGGTTATGGAGAAGGCATTTTATCAACAATAAAAACCCACCATACCAAATAATTGAGTTGTTTCTGAAAAACCATGGTCATCTTGCAGCTAAAAGATACACTTATGCAGAGATAAAGAAAGCAACAAATTCATTCAAAAACAAACTCGGTCAAGGAGGATATGGCAGCGTATACAAAGGAAAATTACAAGATGGAAGTCTCGTGGCGGTAAAAGTATTAAGCGAATCCAATGGTAATGGAGAAGAATTCATCAACGAGGTTGCTAGTATTAGTGTCACTTCTCATGTTAACATTGTTAGTTTATTGGGATTCTACCTAGAAGGTTCTAAAAGAGCTTTGATATATGATTACATGCCTAATGGATCACTTGAGAAGTTCATATATGAAGACAAAGATCCATTAAAGCTAAATCTTCAATTGAGTTGCAAAACTATCTACAACATTGCAGTTGGAGTAGCTCGAGGATTAGAGTATTTGCATAAGGGTTGCAATACTAAAATCTTGCATTTTGATATAAAACCTCACAATATACTGTTAGATGATGATTTTTGTCCTAAGGTTTCGGATTTCGGACTTGCAAAAGTATGTCCGAGAAAAGAAAGTATTATATCTTTATTGGGTGCTAGAGGTACAGCAGGATACATTGCTCCAGAAGTGTTCTCTAGGAATTTCGGCGGTGTCTCTCACAAATCTGATGTTTATAGCTATGGAATGATGGTTTTAGAAATGGTTGGGGGGAAACAGAATAACAATGTTGTTGAAGTTGAACGGTCGAGTGAAATATATTTTCCGCACTGGGTTTACAAGCGTCTTGAACTGAATCAAGAACCTAGATTGCGGAGCATTAAAAATGAATTTGATAAACAAATTGTTCAAAAGATGATTATAGTAAGCTTATGGTGCATTCAGACTGATCCATCCCATAGGCCTGCAATGAGTAAAGTGGTAGATATGATGGAAGGTAGTTTGGAATCTTTGCAAATACCACCAAAACCTTGTCTCTTTTCACCTCCCAGGTCTCCCTCAAGATCATCAGATTATAACACCCATACATCTCAGGATTTGTATCATTCAGATTCACTTCAATACACTGATTCTGAACCTCTAATCATTACGCCTTAG 1956 0.3788 MFSPSHRLLFFSFSIILQLLLASANCPSSFTCGYLGPISFPFTTTQHPNCGMLIIHGCDDSEPQSKKTIQNNKTWFDITKIDPFTITIRDDDLHDILLKRSCDILNYNSKFTVNTPLVSSRLANYITVYGCNSSNAVDLQQYYSVSNSTSICRNENSSLNGVSDSDIKSNKAIVVITDSVPANSNHLRGCSRAMIPTRFEVRSLDPDELFNSLSDEIAIKLQVSQNCSTCHDLDGGQCRLDNYGQFYCQQGKSKKTHLMIMIAVASSTGALVVLAILAWLWRRHFINNKNPPYQIIELFLKNHGHLAAKRYTYAEIKKATNSFKNKLGQGGYGSVYKGKLQDGSLVAVKVLSESNGNGEEFINEVASISVTSHVNIVSLLGFYLEGSKRALIYDYMPNGSLEKFIYEDKDPLKLNLQLSCKTIYNIAVGVARGLEYLHKGCNTKILHFDIKPHNILLDDDFCPKVSDFGLAKVCPRKESIISLLGARGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMVLEMVGGKQNNNVVEVERSSEIYFPHWVYKRLELNQEPRLRSIKNEFDKQIVQKMIIVSLWCIQTDPSHRPAMSKVVDMMEGSLESLQIPPKPCLFSPPRSPSRSSDYNTHTSQDLYHSDSLQYTDSEPLIITP* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5164 651 SUPERFAMILY Protein kinase-like (PK-like) 305 597 IPR011009 -
Psa6g5164 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Psa6g5164 651 ProSiteProfiles Protein kinase domain profile. 321 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5164 651 MobiDBLite consensus disorder prediction 615 636 - -
Psa6g5164 651 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 636 - -
Psa6g5164 651 Gene3D Phosphorylase Kinase; domain 1 300 395 - -
Psa6g5164 651 SMART serkin_6 321 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5164 651 Gene3D Transferase(Phosphotransferase) domain 1 396 606 - -
Psa6g5164 651 MobiDBLite consensus disorder prediction 616 636 - -
Psa6g5164 651 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Psa6g5164 651 Pfam Protein kinase domain 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5164 651 PANTHER RUST RESISTANCE KINASE LR10-RELATED 32 636 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5164 Psa-Chr6 444673953 444676206 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5164 249 612 Receptor kinase-like Gene Family AT4G18250 54.133 5.66e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g5164 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5164 - - gmx:100785979 808.905