Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5160 ATGACTCTATTCCGTATATTATGCTTCCTCTTGGTTTCTTACCTCATGCTGATTTTATCATCAGGGCATGGAAGCGGGTACCAATCTAACTGTCCACCCTCATTCACTTGTGGAAATCGTGGAATTTTTCGTTACCCTTTCACCAAGATAGAACAACCCGACTGTGGCTTCATATTCATATATGGCTGTCGCGGCAGTTATCGTTCACCCAAATTGATCCAATTGGAGAAGAATGCAAAAAACACAGAGCTAACTGCTGTCATTGACCAGAATACCATTACGCTTTCTGATCCAGATTTTTACCAGCGTTTGCAACATAATGTCTGTGACACTTTGAACCACAGTTACCCTCTTCCTCCCCCCTCTCCTTTGGTTTCTTTTTATATAATTTATAATGTAACTCTCTTCCGATGCAATCACGGCCACAATATCAATCCCCCTAGACAGTATTTTCAATACAACTGTTCTTCCTACGATATCTATTATGACAGTAAGCAGCATTCCAATGTTACTAAAGAGAAAGCGCGTAGTTTTTTCTCATCCTGCTCCCTACTTCAGTTTCCATCTAAAGACTTGACTGATACCGAAAACATCTTATCATTTGTATCTGGTCAGATGGTTGTTAAAATAGTACTATCTGCTGATTGTGATGACTGCTACAACCACAGAGGAGGCCAATGTAGACTTAATGCAAACAAGATGTTCTACTGTGACAATGTTACGCATCAGATAAATGCAGTAACGGGTACAAAGAAAAAGAGGCTGATCCGAAATGTCAAACTGGGTATAGGAGCCATGGTGGTGGCTATTGGAATTGCAGTGCTGATGTTGTTGGCTTATGCCATCAGGACAAATATCTTCCCTCCGGCGCTTCTTTTGTTTAGGAAGGACAGTTCATCAACCCATCCAAATATTAAGGAGTTCTTGAAAGAACAAGGACCTCTTCTTGCTGCTAAGTACAGTTACTTAGATGTCAAGAAAATAACTAACTCTTTTAGAAGTAAATTAGGCCAAGGAGGATACGGAAGTGTATATAAAGGGAAGTTACATGATGACCGTATGGTTGCAGTGAAGGTTTTAAGTGAATCAAAAGGTGATGGTGAAGATTTCATTAATGAAGTTGCAAGTATAAGTAGAACTTCGCATGTTAATGTTGTTAGACTTTTAGGTTTCTGTTTGGACGGTTCTAAAAAGGCGCTAATATACGAATTCATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGACAAAAAACCACAGCAGGATGATCTCCAATTGGATTGCAAAACATTGTATGATATTGCAATTGGTGTTGCTCATGGATTAGAGTACTTGCATAGAGGCTGTAACACTAGAATCTTGCATTTTGACATAAAACCTCATAATATATTATTAGACGAGGATTTCTGTCCAAAAATTTCCGATTTTGGACTTGCGAAAATATGTCCAAGAAAAGAAAGCATTGTATCCATATTTGGAGCGAGGGGAACACCAGGATATATTGCTCCAGAGTTGTTTTCAAGAAATTTTGGTGGGGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTTTTAGAGATGGTTGGACGAAGAAAGAACATTAAGGTTGAAGTTGATTGTTCTAGCGAATTATACTTTCCACATTGGGTTTACAAGCGTCTTGAATTGAATCTAGACCTTGGACTTAAGTGTATTAAAAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACCAATCCTTCGAATCGACCATCGATGCATAAAGTGGTGGAAATGTTGGAAGGGAACCTTCAAGTGTTGGAAATGCCACCCAAACCCTTTTTGTCTTCTCCTTCAACATCTCCAACCCATTTATCATCTGAAATCTGA 1905 0.3864 MTLFRILCFLLVSYLMLILSSGHGSGYQSNCPPSFTCGNRGIFRYPFTKIEQPDCGFIFIYGCRGSYRSPKLIQLEKNAKNTELTAVIDQNTITLSDPDFYQRLQHNVCDTLNHSYPLPPPSPLVSFYIIYNVTLFRCNHGHNINPPRQYFQYNCSSYDIYYDSKQHSNVTKEKARSFFSSCSLLQFPSKDLTDTENILSFVSGQMVVKIVLSADCDDCYNHRGGQCRLNANKMFYCDNVTHQINAVTGTKKKRLIRNVKLGIGAMVVAIGIAVLMLLAYAIRTNIFPPALLLFRKDSSSTHPNIKEFLKEQGPLLAAKYSYLDVKKITNSFRSKLGQGGYGSVYKGKLHDDRMVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEDKKPQQDDLQLDCKTLYDIAIGVAHGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICPRKESIVSIFGARGTPGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWVYKRLELNLDLGLKCIKNEIDEEMVRKMTVVSLWCIQTNPSNRPSMHKVVEMLEGNLQVLEMPPKPFLSSPSTSPTHLSSEI* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5160 634 Gene3D Transferase(Phosphotransferase) domain 1 405 620 - -
Psa6g5160 634 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 632 - -
Psa6g5160 634 Pfam Protein kinase domain 334 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5160 634 ProSiteProfiles Protein kinase domain profile. 330 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5160 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Psa6g5160 634 Gene3D Phosphorylase Kinase; domain 1 307 404 - -
Psa6g5160 634 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Psa6g5160 634 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 632 IPR045874 GO:0004672
Psa6g5160 634 SMART serkin_6 330 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5160 634 SUPERFAMILY Protein kinase-like (PK-like) 315 606 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5160 Psa-Chr6 444435635 444438239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5160 254 621 Receptor kinase-like Gene Family AT4G18250 53.191 3.61e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g5160 Pkinase 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5160 - - cam:101490487 763.837