Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5159 GATATTAAAAAAATAACAAACTCTTTCAAAAACAAATTAGGCCAAGGAGGGTATGGAAGTGTATACAAAGGGAAATTACACGATGAGCGTGATGTTGCAGTGAAGATTTTAAGTGAATCAAAAGGTGATGGTGAAGATTTCATTAATGAAGTTGCAAGTATAAGTAGAACATCACATGTCAATGTTGTTAGACTTTTGGGATTCTGTTTGGATGGTTCTAAAAAGGCGCTGATATATGAATACATGTCTAATGGATCTCTTGAAAAGTTCATATACGAAGAGAAAAATCCACTGCAGGATGATCGTCAATTGGATTGCAAAACTTTGTATCATATTGCAGTTGGTGTTGCTCGTGGATTAGAGTACTTGCACAGAGGCTGCAACACTAGAATCTTGCATTTTGACATAAAACCTCATAATATATTACTAGATGAGGATTTCTGTCCAAAAATTTCCGATTTTGGACTTGCTAAAATATGTCCAAAAAAAGAAAGCATTGTATCCATATTTGGTGCGAGGGGAACACCAGGATATATTGCTCCAGAGTTGTTTTCCAGAAATTTTGGTGGCGTATCACATAAATCAGATGTCTACAGTTACGGAATGATGGTTTTAGAGATGGTTGGTCGAAGAAAGAATATTAAGGTTGAAGTTGATTGTTCTAGCGAGCTATACTTTCCACATTGGATTTACAAGCGTCTTGAATTGAATCAGGATCTTGGACTAAATTGTATCAAAAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACGAATCCTTCGAATCGACCATCGATGCATAAAGTGGTGGAAATGTTGGAAGGGAGCCTTCAAGTGCTGGAAATACCACCCAAACCCTTTTTGTCTTCTCCTTCAACATCTCCAACCCATTTATCATCTGATATATTGTAA 939 0.3621 DIKKITNSFKNKLGQGGYGSVYKGKLHDERDVAVKILSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEYMSNGSLEKFIYEEKNPLQDDRQLDCKTLYHIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICPKKESIVSIFGARGTPGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLNCIKNEIDEEMVRKMTVVSLWCIQTNPSNRPSMHKVVEMLEGSLQVLEIPPKPFLSSPSTSPTHLSSDIL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5159 312 Gene3D Transferase(Phosphotransferase) domain 1 82 296 - -
Psa6g5159 312 ProSiteProfiles Protein kinase domain profile. 7 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5159 312 Pfam Protein kinase domain 10 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5159 312 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 309 IPR045874 GO:0004672
Psa6g5159 312 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 309 - -
Psa6g5159 312 SUPERFAMILY Protein kinase-like (PK-like) 6 283 IPR011009 -
Psa6g5159 312 PIRSF ILK 2 290 - -
Psa6g5159 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Psa6g5159 312 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Psa6g5159 312 ProSitePatterns Protein kinases ATP-binding region signature. 13 35 IPR017441 GO:0005524
Psa6g5159 312 SMART serkin_6 7 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5159 Psa-Chr6 444425260 444426552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5159 2 298 Receptor kinase-like Gene Family AT4G18250 61.639 6.60e-130 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g5159 Pkinase 5.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5159 - - cam:101505872 565.074