Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5151 AAGGTTTTAAGTGAATCAAAAGATAATGGTGAAGATTTTATTAATGAAGTTGCAATTGGCGTTGCTCGAGGACTAGAGTATTTGCATAGAGGTTGCAACGCTAGAATCTTACATTTCGACATAAAACCTCATAATATATTACTTGATGAGGATCTATGTCCGAAAATTTCAGATTTTGGACTTGCTAAAATATGTCTAAAAAATGAAAGCATTGTATCTATATTTGGTGCAAGGGGAACACCAGAATATATTGCTCAAGAGTTGTTCTCCAGAAATTTTGGCGGAGTGTCACATAAATCAGATGTCTATAGTTATGGAATGATTTTAGAAATGGTTGGTCGAAGTAAGAACATTAAACTTGAAGTGGATTGTTCTAGTGAATTATATTTTCCACACTGGATTTATAAACGTCTTGAATTGAATCAGGATTTTGGACTTAAGTGTATTAAAAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAATGGTGAGTTTATGGTGCATACAAACTGACCCTTCAAATCGACCATCAATGCGTAAAGTGGTGGAAATGTTGGAAGGGAGCCTTCAAGTGCTGGAAATACTGCCCAAACCCTTTTTGTCTTCTCCTTCAACATCTTCAATCCATATATCATCTGAAATGTTGTAA 651 0.3425 KVLSESKDNGEDFINEVAIGVARGLEYLHRGCNARILHFDIKPHNILLDEDLCPKISDFGLAKICLKNESIVSIFGARGTPEYIAQELFSRNFGGVSHKSDVYSYGMILEMVGRSKNIKLEVDCSSELYFPHWIYKRLELNQDFGLKCIKNEIDEEMVRKMTMVSLWCIQTDPSNRPSMRKVVEMLEGSLQVLEILPKPFLSSPSTSSIHISSEML* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5151 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Psa6g5151 216 SUPERFAMILY Protein kinase-like (PK-like) 10 187 IPR011009 -
Psa6g5151 216 SMART serkin_6 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5151 216 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.1 15 207 - -
Psa6g5151 216 Gene3D Transferase(Phosphotransferase) domain 1 4 198 - -
Psa6g5151 216 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 207 IPR045874 GO:0004672
Psa6g5151 216 Pfam Protein kinase domain 6 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5151 216 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5151 Psa-Chr6 444194330 444195165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5151 17 202 Receptor kinase-like Gene Family AT4G18250 60.622 5.60e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g5151 Pkinase 3.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5151 - - mtr:MTR_1g110140 344.354