Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5125 ATGGAGGCGCAACCCCAACCTCCAACGCCGTCAACGGCACCGCCGTTATCCTCCGTTGCACCACCGCCACCACACCTCAACTACCCCGATTCAGTCGACTCCTCTCCGCGTTCTCGCAACACGGATTCGTGGGACGAACCTTTCCCTCCGGCGTCAACGAAACTCCGTCTCATGTGCAGTTACGGCGGCCACATCGTTCCTCGTCCACATGATAAATCTCTCTGTTACGTCGGCGGTGATACTCGAATCGTGGTGGTTGAGCGTGTAACCTCACTCGCGGAGTTATCCACGCGCCTCTCGAAAACCTTCCTTAACGGAAGACCGTTCACGCTGAAGTATCAGCTTCCGAACGAAGATTTAGATTCATTGATTTCTGTTACCACTGATGAAGATTTGGAAAACATGATCGATGAATACGATCGAACGGCTTCGGCGAATTCTTCTATCAAACCCTCGCGAATTCGGCTTTTTCTTTTTCCGACTAAACCTGAATCTGCTCACTCGATTCCGCCACAAATTCTCGATACTTCGGCTAAATCGGATGATTGGTTCCTTGATGCGTTAAACGGTGCTGGATTGCTTAATCGAGGGTTTTCTGAATCGGCTTCTGTTAACAATCTTTTAGGTCTTGATGATGATGTAGCTGGGAATAATATTGAACCTGGCTCTAGAGAACCTCCTGAAGGTGTTTCTCAACCTGGATCTTTTGGGAATGGTAAGAATTTGAAGCAGGATGTTCACTCGGTTCCTGATTCTCCTATGATGGAAACTTCGTCGTCTTTTGGTTCAACCTCCTCGTCTCCGTCGTTGGCGAATTTGCCTCCAATTAGGGTGCATGTGGAAGATGGTAATTCTGCTGGAGTTAGGGTTCAGCAGCAACAGCTGCAACAGCAGGATCAGAAGGTTTTGGGGATTGAAGAACAGTTTGCTCAAATGGGAGTTGGTGTTGTTCAGAAGCAGGATGAGGGATTTGCTGTGATGTCTTCGCCGCCTCATCCACCGGTTCCGACTACTCTTGCTACGGCGGTGATTGGTGTTCCGATTGGTTCTGCTGTGGCTGTTGGTGAATATCAGAATAGAGTTTTCTCTGATGATGAGAGATCTGATCATGGAGTGGCTGTGGGATATAGAAAACCACCAAATCCTCAGCCACAGGTTGTTCAACAGCCACCGGCTCAAACTCAGCAACAACCACAACAACCTCCTCAATTTCAACAAAAGTCGAGTGGTGGAGGAGGCGCTGATTTGCCTTCTCCTGATTCAGTTGCAAGTGATAATAGTAGTCTTTCAAATCCAATGTCACGTCAAAAACCTGTTATCTATCAAGAGCAAGTTCAGATTCAATCTGGAGCTACAAGGGTTCTAAGTAACCCTGTGGATCCGAAACTCAATTTATCTGATCCACAGGGTAGGATCCAATTGCAGCAACACGTACAGGACCCTGGATATTTACTGCAACAACAATTTGAACTCCAGCAGCAACAGCAGCAATTCGAACTACAGCAACATCAGCAACATCAGCAACAGTTTGAACTCCAGCAGCAGCAACAGCAGCCTCAACAACAACAACAGCAGCCTCAACATCAACAGCAACAGCAGCCTCAACATCAACAACAGCAACAGCAGCCTCAACAGCAGCAGCTTCAACAACAGCTTCAACAACAGCAGCAGCAGCAGCAGCAGCAGTTTATACATGGGGGACACTACATTCATCATAACCCTGCAATTCCTGCATACTATCCTGTATATCCTTCACAGCAACAGCCCCATCATCAGGTTTACTATGTTCCTGCAAGACAGCCACAAGCTTACAATCTTCCTGTGCAGCAGGCTAATATAGGGGATTCTGCCACAACAATGTCTTCTAGTAGACCCCAAAACCCTCCAAACCCTACTACACTGGTTCAACCAAATGCAGCTTACAACCCCATTAGAAATGCCCCCCTACCCAAAACAGAAATGACAGCAGCTGCTTACAGAGCTGCAACTTCAGGCAACCCTCAATTTGTACAAGTTCCTACAGCCCAGCATCAGCAACAATATGTCACTTACTCTCAGATCCACCATCCTTCCCAATCCATGGCCCCTAATTCTGCTGCCCCTGCCAATTATGCCTATGAATTTGCTGATCCTGCACATGCTCAAATATACTACTCTCAGCCTATGGCGCCCACAATGCCTTCACAGTACCAGACCATGGCAGCTGCTACTCTGATGCAGCCGGAAATTTCTGCACAGCATCCCTCGGATGGCATGAAGCAACAGATAAGAACCTCACAGCAGCTATAA 2289 0.4775 MEAQPQPPTPSTAPPLSSVAPPPPHLNYPDSVDSSPRSRNTDSWDEPFPPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERVTSLAELSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASANSSIKPSRIRLFLFPTKPESAHSIPPQILDTSAKSDDWFLDALNGAGLLNRGFSESASVNNLLGLDDDVAGNNIEPGSREPPEGVSQPGSFGNGKNLKQDVHSVPDSPMMETSSSFGSTSSSPSLANLPPIRVHVEDGNSAGVRVQQQQLQQQDQKVLGIEEQFAQMGVGVVQKQDEGFAVMSSPPHPPVPTTLATAVIGVPIGSAVAVGEYQNRVFSDDERSDHGVAVGYRKPPNPQPQVVQQPPAQTQQQPQQPPQFQQKSSGGGGADLPSPDSVASDNSSLSNPMSRQKPVIYQEQVQIQSGATRVLSNPVDPKLNLSDPQGRIQLQQHVQDPGYLLQQQFELQQQQQQFELQQHQQHQQQFELQQQQQQPQQQQQQPQHQQQQQPQHQQQQQQPQQQQLQQQLQQQQQQQQQQFIHGGHYIHHNPAIPAYYPVYPSQQQPHHQVYYVPARQPQAYNLPVQQANIGDSATTMSSSRPQNPPNPTTLVQPNAAYNPIRNAPLPKTEMTAAAYRAATSGNPQFVQVPTAQHQQQYVTYSQIHHPSQSMAPNSAAPANYAYEFADPAHAQIYYSQPMAPTMPSQYQTMAAATLMQPEISAQHPSDGMKQQIRTSQQL* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5125 762 PANTHER EXPRESSED PROTEIN 570 753 - -
Psa6g5125 762 PANTHER EXPRESSED PROTEIN 13 559 - -
Psa6g5125 762 MobiDBLite consensus disorder prediction 420 437 - -
Psa6g5125 762 SMART PB1_new 69 161 IPR000270 GO:0005515
Psa6g5125 762 PANTHER OS05G0427100 PROTEIN-RELATED 13 559 - -
Psa6g5125 762 PANTHER OS05G0427100 PROTEIN-RELATED 570 753 - -
Psa6g5125 762 MobiDBLite consensus disorder prediction 31 47 - -
Psa6g5125 762 CDD PB1_UP2 58 159 - -
Psa6g5125 762 MobiDBLite consensus disorder prediction 380 437 - -
Psa6g5125 762 MobiDBLite consensus disorder prediction 510 544 - -
Psa6g5125 762 ProSiteProfiles PB1 domain profile. 54 161 IPR000270 GO:0005515
Psa6g5125 762 SUPERFAMILY CAD & PB1 domains 70 169 - -
Psa6g5125 762 MobiDBLite consensus disorder prediction 388 412 - -
Psa6g5125 762 MobiDBLite consensus disorder prediction 1 49 - -
Psa6g5125 762 MobiDBLite consensus disorder prediction 1 29 - -
Psa6g5125 762 Pfam PB1 domain 70 160 IPR000270 GO:0005515
Psa6g5125 762 Gene3D - 74 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5125 Psa-Chr6 441854105 441858735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5125 54 189 MAP Kinase Kinase Kinase AT5G57610 41.176 1.15e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5125 - - mtr:MTR_1g109470 693.73