Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5074 ATGAGCAGCTCAAGGATAGTTCCCAATTATGAAGATGCAGAAGCATTTATGGCGGCAGTGAAATTTGTGTTGAAAGATAAGAGTGAAGAGTATACAGAATTCTTAAAAATCCTTATTGATTACAAAGCCAAAAGAGTTGATATAGAAGCTATCAAAAAATTTGCGATAGAGTTGTTTCAAGAGCATACGGATATGATTTCAAGATTGAACATCTTCATGCCACCTGGTCACCATATCTCACTCCCATTGGATGATGAACAACGAGGTGATGACGATGTAGCGAAAGAAGAACAGAAAGATGATGAGGGTGATGGCGATGCATTAGCTGTCAATGCTAATGAACAACAAGGTGATGGCAAAGATGTTGAACAACAAGCTGATGACAAAGATGTTGAACAACAAGGTGATGACAAAGATGTTGAACAACAACGTGATGGCAAAGATGTTGAGCAACAAGGTGATGGCAAAGATGTTGAACAACAAGGTGTTCTTCGTAACTCTAAAATGTTAACCTTGAGGTTCATTCCAATGCCTATCAGAAATCGACCAAATTTTATAATTCGGAACATACATTCGGGAACTAAAGTCTCCGATATGAAGAAATTCCTTGAACTTCACGTGAGCAACGCTGTACCGCAAGACGGCAAATTCTTTTTTATCCACAATCATCGAGTAATGTATGAGAATCAATCCTTTGAGATGCATGATGCTCGGACTGGTGACAGGATTGAACTATTTGATGGGGTCATCATCGCAGGCGATGATTAG 768 0.3919 MSSSRIVPNYEDAEAFMAAVKFVLKDKSEEYTEFLKILIDYKAKRVDIEAIKKFAIELFQEHTDMISRLNIFMPPGHHISLPLDDEQRGDDDVAKEEQKDDEGDGDALAVNANEQQGDGKDVEQQADDKDVEQQGDDKDVEQQRDGKDVEQQGDGKDVEQQGVLRNSKMLTLRFIPMPIRNRPNFIIRNIHSGTKVSDMKKFLELHVSNAVPQDGKFFFIHNHRVMYENQSFEMHDARTGDRIELFDGVIIAGDD* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5074 255 ProSiteProfiles PAH domain profile. 6 76 IPR003822 GO:0006355
Psa6g5074 255 MobiDBLite consensus disorder prediction 81 106 - -
Psa6g5074 255 Gene3D Paired amphipathic helix 12 74 IPR036600 GO:0006355
Psa6g5074 255 PANTHER PROTEIN, PUTATIVE-RELATED 9 96 - -
Psa6g5074 255 PANTHER SIN3B-RELATED 9 96 IPR039774 GO:0003714
Psa6g5074 255 MobiDBLite consensus disorder prediction 120 155 - -
Psa6g5074 255 MobiDBLite consensus disorder prediction 81 162 - -
Psa6g5074 255 SUPERFAMILY PAH2 domain 9 75 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5074 Psa-Chr6 439484073 439485026 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa6g5074 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5074 - K02999 mtr:MTR_1g104940 110.153