Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5012 ATGATGAAACTTAACACCCTATTGAGTTTTCCATCTTTTCTTGTTCTTCTATTTCTTCAATATTCAGTTGCTCTTAACTCTGATGGAATTTTCCTGCTGAAGTTCAGATACTCTATCCTCAGTGACCCTTTATCAGTCTTTGAAAACTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTGCATGTAGTGGACTAGGATCTCCTAATACACCTGATTTCTTCAGAGTAACTAGCTTGATTCTTCCTAATAGCCAACTACTTGGTTCCATTGCAGAAGATTTAGGCTTTATTCAAAACCTTCATCACATTGATCTCTCAAACAATTTCCTCAATGGTTCATTACCAAACTCTATCTTCAACTCTTCGCAACTACAGTTCCTTTCACTCTCCAACAATGTCATCTCAGGTAAACTACCTGAGTTGGTTGGTTTATCAACAAACCTACAAATTCTCAACCTTTCTGATAATGCCTTTGTTGGGTCTATCCCAGAAAACCTAACTTCTCTACATAATCTAACAATTGTTTCTCTAAAAAGTAACTATTTTTCTGGTGAAATCCCAAATGGTTTCAACTCTGTTGTGATTCTAGATCTGTCCTCAAACCTACTCAACGGTTCTCTCCCAAGTAGCTTCCAAGGAGAAAATCTTCAATACTTGAACCTCTCTTATAATAAACTCTCTGGAGCAATTCCACAAACATTTACAAGGCACATTCCGGAAAAATCTACAATTGATCTCTCATTCAACAACCTAACAGGACCAATCCCTGAATCTTTGTTCAATCAAAAAACAGAATCACTCTCTGGAAACTCTGATCTATGTGGAAAACCTCTGAAGATTCTTTGTACTATTCCATCTACCATGTCTACTGCACCACATATCACAAACTCATCTTCACCAGCAATTGCAGCCATACCAATAACAATAGACTCAACACCAGGAAATAACACAAACACAACAACTACAACAACAACTAGCGGTGGTTCTCAGAACAGTCTAAAACCTGCTACAATAGCTGCCATTGTTGTTGGAGACATAGCAGGCATGGCAATTTTGGCTCTTATCATTCTCTTTGTATATCAACAAAGAAAGAAAAGATATCCAAAATCAACCACTGTACTTCAAGAGACCAAAGTCTCAGAAACGGTAGCTAAACAAGAACAACAAGACGTGAAAACACACTCACTTCATTGTTCTACATGCTGTTTAACAACTAAACAAGAAGAAACATCAGAAGCAACAACCTCCGATGACAGTGACCGCGACATCGGGAACCTTCCGAAAGAAGGCACACTCGTAACGGTAGACGGCGAGACTAAGATGGATTTGGAAACATTATTGAAGGCTTCAGCTTATATACTCGGAACAAGCCGTGCGAGCATTGTGTATAAAGCAGTTTTACAGGATGAAAGAGTTTTCGCTGTTAGAAGGATCGGCGAATGCGGTGTGGAAAGAATGAAAGAGTTTGAGAATCAAATTCGAGTTATCGCGAAGATTCGTCATCCGAATTTGGTTAAGATTCGCGGTTTCTGTTGGGGTGAAGATGAGAAGCTTGTTATCTCTGATTTTGTTCCTAATGGCAGCCTCTCCGCTATTGGTTACAGAAGAGGAGGGTTGTCGCCGATGAACTTATCTTTGGAGATTCGGTTGAAGATAGTGAAAGGGGTGGCAAGAGGACTTGCTTACATTCATGAGAAGAAACATGTGCATGGAAATGTTAAACCAAGCAACATTTTATTAAGTTCAGAAATGGAACCTATTATAAGTGATTTTGGACTTGATTTGCTTCTTTTGAATGATGTCAACCATAGAGGAAACGGTTCAGCTAGACTATTAGTGAACCAGAAAAACCAACAGCAACAAGAGTTTCTCATTGGTTCGACTCCGAGTCCGTATACGACAATGGGGTCATCTTCGTCGACAAGTGGTGGTGGTTGCGGTGGTGGTGGTGGTCAAGTACAACAATATCAAGCACCGGAATCTTTTCAAAATATTAAACCAAACGGTAAAATGGATGTGTATTCGTTTGGTGTCGTTTTGTTGGAGCTTTTTAGTGGGAGGGTTTTCTCGGACCGGGAATTGGACCAGTGGTCTGTTCCGGTTGGTTCGGTTGAAGAGGAAAAAAACCGGGTTTTTAGGTTGGTTGACGTGGCGATTAAGCATGAGATAGAAGGTAGAGAAAATGTGGTGTTCACGTGTTTGAAATTGGGGTTGAATTGTGTTTCCCTTGTCCCACAAAAGAGACCGTCCATGAAAGAAGCATTTCAAACCTTAGAGAAGATCTGGACCGTTGGTTTTAATTAA 2313 0.4003 MMKLNTLLSFPSFLVLLFLQYSVALNSDGIFLLKFRYSILSDPLSVFENWNYDDATPCSWHGVACSGLGSPNTPDFFRVTSLILPNSQLLGSIAEDLGFIQNLHHIDLSNNFLNGSLPNSIFNSSQLQFLSLSNNVISGKLPELVGLSTNLQILNLSDNAFVGSIPENLTSLHNLTIVSLKSNYFSGEIPNGFNSVVILDLSSNLLNGSLPSSFQGENLQYLNLSYNKLSGAIPQTFTRHIPEKSTIDLSFNNLTGPIPESLFNQKTESLSGNSDLCGKPLKILCTIPSTMSTAPHITNSSSPAIAAIPITIDSTPGNNTNTTTTTTTSGGSQNSLKPATIAAIVVGDIAGMAILALIILFVYQQRKKRYPKSTTVLQETKVSETVAKQEQQDVKTHSLHCSTCCLTTKQEETSEATTSDDSDRDIGNLPKEGTLVTVDGETKMDLETLLKASAYILGTSRASIVYKAVLQDERVFAVRRIGECGVERMKEFENQIRVIAKIRHPNLVKIRGFCWGEDEKLVISDFVPNGSLSAIGYRRGGLSPMNLSLEIRLKIVKGVARGLAYIHEKKHVHGNVKPSNILLSSEMEPIISDFGLDLLLLNDVNHRGNGSARLLVNQKNQQQQEFLIGSTPSPYTTMGSSSSTSGGGCGGGGGQVQQYQAPESFQNIKPNGKMDVYSFGVVLLELFSGRVFSDRELDQWSVPVGSVEEEKNRVFRLVDVAIKHEIEGRENVVFTCLKLGLNCVSLVPQKRPSMKEAFQTLEKIWTVGFN* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5012 770 Gene3D Ribonuclease Inhibitor 25 194 IPR032675 -
Psa6g5012 770 Gene3D Phosphorylase Kinase; domain 1 431 526 - -
Psa6g5012 770 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Psa6g5012 770 ProSiteProfiles Protein kinase domain profile. 451 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5012 770 MobiDBLite consensus disorder prediction 630 653 - -
Psa6g5012 770 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 21 764 - -
Psa6g5012 770 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Psa6g5012 770 PANTHER OS04G0122200 PROTEIN 21 764 - -
Psa6g5012 770 Gene3D Transferase(Phosphotransferase) domain 1 527 767 - -
Psa6g5012 770 SUPERFAMILY Protein kinase-like (PK-like) 456 764 IPR011009 -
Psa6g5012 770 Pfam Protein kinase domain 457 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5012 770 Gene3D Ribonuclease Inhibitor 195 287 IPR032675 -
Psa6g5012 770 CDD TM_EGFR-like 340 369 - -
Psa6g5012 770 Pfam Leucine Rich Repeat 218 237 IPR001611 GO:0005515
Psa6g5012 770 Pfam Leucine Rich Repeat 102 121 IPR001611 GO:0005515
Psa6g5012 770 Pfam Protein tyrosine and serine/threonine kinase 657 759 IPR001245 GO:0004672|GO:0006468
Psa6g5012 770 SUPERFAMILY L domain-like 31 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5012 Psa-Chr6 434631672 434635090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5012 24 765 Receptor kinase-like Gene Family AT2G15300 48.903 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa6g5012 TMEM51 2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5012 - - gmx:100820334 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5012 6 434631672 434635090 Psa6g5012 6 434631672 434635090 ECH