Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4964 ATGGGGACCAGGCCAGGTGTTGGAGGGCAGAAAGGTCCTAAGAAGACCAAAGCAGACAACCACCCCACTTCAACTGGACATGCAAAGAAAAAAGAGAAACTTGGTGAACGAATTGCAGCATTACAACAACTTGTTTCTCCCTTTGGAAAGACTGATACTGCTTCGGTGCTTCACGAGGCAACTGGTTACATAAGATTCTTACATGATCAAGTTCAGGTTCTGTGCTCTCCATACCTCCAACCTTCACAAATTCAATTTCAAAATGGGGACGGAGATAACAATGGAAGAGAAGAAAACACAGAAGTGAACAAAGATTTAACTAGCAGAGGTTTATGTTTGATCCCTGTTGGAAACACCTTACACGTGGCAGGCAGTAACGGGGCTGATTTTTGGTCACCAGCAACGACAGACAACAATGTTGTTTCACCTTCAACTACTATTCCTAAGCAGTACTAG 456 0.4364 MGTRPGVGGQKGPKKTKADNHPTSTGHAKKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHDQVQVLCSPYLQPSQIQFQNGDGDNNGREENTEVNKDLTSRGLCLIPVGNTLHVAGSNGADFWSPATTDNNVVSPSTTIPKQY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4964 151 PANTHER TRANSCRIPTION FACTOR BHLH103 31 125 - -
Psa6g4964 151 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 125 - -
Psa6g4964 151 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 67 IPR011598 GO:0046983
Psa6g4964 151 CDD bHLH_AtbHLH_like 29 74 IPR045239 -
Psa6g4964 151 MobiDBLite consensus disorder prediction 1 33 - -
Psa6g4964 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 84 IPR036638 GO:0046983
Psa6g4964 151 MobiDBLite consensus disorder prediction 14 33 - -
Psa6g4964 151 Gene3D - 27 85 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4964 Psa-Chr6 431964251 431965958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4964 1 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 44.853 7.24e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4964 - - mtr:MTR_1g107185 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4964 6 431964251 431965958 Psa6g4964 6 431964251 431965958 ECH