Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4950 ATGATCGAGGGAGATGAAACAACTCTTGCAGCAACAGCCAAGGAACAACCAGGTGAAGTGATGGACAGAGATAAGAACAACGATGATGGAAGTGAACATGACGATGATCCCAAAGAGTGGTTAAACCTGAGCTTAGGAGGCACTTCACTCTCAACAGCTGAAGACCCTGATTCACAATCAAGACCGGCCAAAGTTTTTTCGTGCAATTTTTGCATGAGAAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAATGCTCACAAAAGGGAAAGAGGTGCAGCCAGAAGATATCAATCCCAGAGTCAGAGGACGATGGCAGTAATGAGCTTGTCAATGAACAATCCAATGTTTCGATCGCTTGGTGTCCAGGCTCATTCACTAGTGCATAAGCCATGTAGAGGAGGAACTATGGTGGCCCCAAGCTTTCAAGAAGCATATGCAGCAGGGCTTGGAATGGCTTGTACACCTTTCACATCTGAATATCATACTGATCAGGTGTGGCCAGGCAGCTTTCGTATGGTTTCACAACAGTCCCAGCCACCACAGGAATCACACAAGCTTGATTTAGACCTCAGACTCTGA 585 0.4581 MIEGDETTLAATAKEQPGEVMDRDKNNDDGSEHDDDPKEWLNLSLGGTSLSTAEDPDSQSRPAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQSQRTMAVMSLSMNNPMFRSLGVQAHSLVHKPCRGGTMVAPSFQEAYAAGLGMACTPFTSEYHTDQVWPGSFRMVSQQSQPPQESHKLDLDLRL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4950 194 MobiDBLite consensus disorder prediction 17 40 - -
Psa6g4950 194 MobiDBLite consensus disorder prediction 44 59 - -
Psa6g4950 194 Gene3D Classic Zinc Finger 49 116 - -
Psa6g4950 194 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Psa6g4950 194 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 194 - -
Psa6g4950 194 MobiDBLite consensus disorder prediction 174 194 - -
Psa6g4950 194 MobiDBLite consensus disorder prediction 1 59 - -
Psa6g4950 194 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Psa6g4950 194 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Psa6g4950 194 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4950 Psa-Chr6 431162493 431163077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4950 41 182 C2H2 Transcription Factor Family AT1G24625 38.255 8.28e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4950 - - ahf:112779836 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4950 6 431162493 431163077 Psa6g4950 6 431162493 431163077 ECH