Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4934 ATGCTGCGTTTGTGCTTCAGCCCTCTCGATTTTTGCTTCCGACGTCGTGCTGCCTCTGATTTTCTTCTCTGGCACACCGACTTGAAACCTCACGCTTCCGGTGATTTCTCCATAGCCGTCGCTCAGGCTAATTACTCCCTTGAGGATCAGAGTCAAGTCTTTACCTCCCCTTCCGCCACCTACGTCGGTGTTTACGACGGTCATGGTGGACCCGAAGCCTCTAGATTCGTCAATAACCGTCTCTTCCCTTATTTGCACAAATTTGCATCTGAGCAAGGGGGATTGTCAGTTGATGTGATAAAGAAGGCGTTTAGTGCCACCGAGGAGGATTTCTTGCATTTGGTTAAGTTGTCCTTGCCTCTTAGTCCCCAGATTGCGTCGGTGGGTTCGTGTTGTCTTCTTGGTGCAATTTCTAATAATGTGTTATATGTTGCCAACCTTGGAGACTCTAGAGTTGTTCTTGGGAGGAAGTATGAGAACAAGAGTTGTTCTGTGGAGGCTGTGCGCTTGTCAACGGATCATAACGTAGCCGACGAGGAGGTGAGGAGAGAAGTTGAAGCTCTCCACCCCGATGATTCACATGTTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGCATCATTCAGGTGTCTAGATCTATTGGTGATGTGTATTTGAAGAGACCAGATTTCTACCGAGACCCCGTTTTCCGGCAATTTGGAAATCCTATTCCTTTGAAGCGTCCAGTAATGACAGCTGAACCATCAATCATCATTAGGGAGCTTGAGTCAGATGATTTATTCTTAATATTTGCATCAGACGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGTTGATCTTGTTTTCAAATATCCAAGAGCCGGAATCGCCAAGAGACTAGTAAGAGCTGCTCTCCAAGAAGCTGCAAAAAAAAGAGAGATGAGATATGCTGACATAAAGAAAATCGACAAAGGAATTAGAAGACACTTCCATGACGATATCACCGTTATTGTAATCTATCTTAATCAACAAAGAGGCTCTTCTAGTGGTGGATCTAAGCAAACTGCTGTTGGCTATACAACTGCCCCAGTTGATATATTTTCTCTAAATGCCGATGAGGCTGAGAAGAGTATGCTTGGCTCAGTGGCCTAA 1137 0.4521 MLRLCFSPLDFCFRRRAASDFLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNNRLFPYLHKFASEQGGLSVDVIKKAFSATEEDFLHLVKLSLPLSPQIASVGSCCLLGAISNNVLYVANLGDSRVVLGRKYENKSCSVEAVRLSTDHNVADEEVRREVEALHPDDSHVVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFRQFGNPIPLKRPVMTAEPSIIIRELESDDLFLIFASDGLWEQLSDEAAVDLVFKYPRAGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVIVIYLNQQRGSSSGGSKQTAVGYTTAPVDIFSLNADEAEKSMLGSVA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4934 378 Pfam Protein phosphatase 2C 56 305 IPR001932 -
Psa6g4934 378 PANTHER ALPHABET, ISOFORM E-RELATED 4 373 - -
Psa6g4934 378 CDD PP2Cc 48 336 IPR001932 -
Psa6g4934 378 Gene3D - 25 343 IPR036457 -
Psa6g4934 378 ProSiteProfiles PPM-type phosphatase domain profile. 35 336 IPR001932 -
Psa6g4934 378 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 373 - -
Psa6g4934 378 SMART PP2C_4 29 334 IPR001932 -
Psa6g4934 378 SUPERFAMILY PP2C-like 44 337 IPR036457 -
Psa6g4934 378 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4934 Psa-Chr6 430303057 430305924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4934 20 346 PP2C-type Phosphatase Gene Family AT3G51370 56.418 1.43e-140 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4934 - K01102 gmx:100812137 647.891