Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4932 ATGATCATGAATGCCAAAAGGAGCATCAATAAATCTGAAGATGACATACCGATTCCTCCTCTTCTGCAAAATGCAGCTCTTTGGGGTTTCTTCCTCGCCGTGTCATCCAACACACAGTATCAAATTATCAACGAACTGGAAGCAGGGGCGGTGGAGACGGTCGTCGGCGATGCAGACAAGAAATCAACAAGTGTTGGTGAAAAGAATGTCTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTTTGCTTACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCAATGCCGGAGACACCCATCTTGGAGGTGAGGATTTTGATAATAAAATGGTGAACCATTTTGTTCAAGAGTTCAAGAGAAAGAACAAGAAGGACATCAGCGGTAACCCTAGGGCACTCAGGCGATTGAGGAATGCATGTGAGAGGGCGAAAAGAACTCTTTCATCTACTGCAGAGACTACCATTGAAATTGACTCTCTATTTGAGGGAATTGATTTCTACTCCCCTATCAACTCTCATTATTATTATTCATTTTAA 543 0.4217 MIMNAKRSINKSEDDIPIPPLLQNAALWGFFLAVSSNTQYQIINELEAGAVETVVGDADKKSTSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKANAGDTHLGGEDFDNKMVNHFVQEFKRKNKKDISGNPRALRRLRNACERAKRTLSSTAETTIEIDSLFEGIDFYSPINSHYYYSF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4932 180 Pfam Hsp70 protein 41 167 IPR013126 GO:0005524|GO:0140662
Psa6g4932 180 ProSitePatterns Heat shock hsp70 proteins family signature 2. 72 85 IPR018181 -
Psa6g4932 180 Gene3D Actin; Chain A, domain 4 104 173 - -
Psa6g4932 180 Gene3D - 40 60 - -
Psa6g4932 180 Pfam Protein RETICULATA-related 2 44 IPR021825 -
Psa6g4932 180 PANTHER HEAT SHOCK PROTEIN 70KDA 40 173 IPR013126 GO:0005524|GO:0140662
Psa6g4932 180 SUPERFAMILY Actin-like ATPase domain 66 177 IPR043129 -
Psa6g4932 180 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 40 173 - -
Psa6g4932 180 Coils Coil 135 155 - -
Psa6g4932 180 Gene3D - 61 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4932 Psa-Chr6 430164405 430165485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4932 41 177 Calmodulin-binding Proteins AT3G09440 82.482 5.55e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4932 K03283 - mnt:21408981 223.016