Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4931 ATGGGACACAGCAACGTCTGGAATTCTCATCCCAAAACCTACGGTCCCGGTTCTCGCACTTGCCGTGTGTGTGGGAATTCACATGGATTGATCAGGAAGTATGGCCTTATGTGCTGCAGGCAGTGCTTCCATAGCAACGCCAAGGAGATTGGTTTCATTAAGGTTAATATTTCAATGTCTTGTTCTCAAATTTATTCCTCTGGTGAGTTTGTAGAGGTCTAA 222 0.4505 MGHSNVWNSHPKTYGPGSRTCRVCGNSHGLIRKYGLMCCRQCFHSNAKEIGFIKVNISMSCSQIYSSGEFVEV* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4931 73 Pfam Ribosomal protein S14p/S29e 7 54 IPR001209 GO:0003735|GO:0005840|GO:0006412
Psa6g4931 73 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 IPR039744 GO:0003735|GO:0008270
Psa6g4931 73 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Psa6g4931 73 PANTHER RIBOSOMAL PROTEIN S14P/S29E FAMILY PROTEIN-RELATED 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4931 Psa-Chr6 430083173 430083613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4931 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 2.45e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4931 K02980 - lsv:111921360 126.331