Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4874 ATGGTGTTTTTTCTATTAGCACCCCCATTTAACCTCCTTCCATGGCTGAAAGCTTTGACAAGTGCTACATCTAATCTTTTATGTTCTGAAACCCATAACACATGCTTTGATGAGGATTTGGAATGCAATGGTGCTGTTGATGGTTCTGGAATCTCAACTTCATGGGACCACATGAACCTTAACTTGGACAACTTGGACAACGTTGGATCGGAATCATTTGTGTGTTTTGTTGCACAGAATGAGGAAATTGTGAGGGTTATGGTTGAGAAAGAGATTGAACATTTGCCTAGAGAGGATTATTTGATGAGATGGCGAAGTGGTGACTTGGAGGTGAGTGTTAGAAGAGAGGCTCTTGATTGGATTTGGAAGGCTCATGCTTATTATGGATTTGGACCATTGAGTCTTTGCTTATCGGTGAACTACTTGGATCGGTTCTTATCGGCTTATCAATTACCAAGAGGTGTGTTTGGATGA 474 0.4114 MVFFLLAPPFNLLPWLKALTSATSNLLCSETHNTCFDEDLECNGAVDGSGISTSWDHMNLNLDNLDNVGSESFVCFVAQNEEIVRVMVEKEIEHLPREDYLMRWRSGDLEVSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSAYQLPRGVFG* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4874 157 PANTHER CYCLINS 65 151 IPR039361 -
Psa6g4874 157 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Psa6g4874 157 CDD CYCLIN 114 153 IPR013763 -
Psa6g4874 157 Pfam Cyclin, N-terminal domain 82 153 IPR006671 -
Psa6g4874 157 Gene3D - 97 153 - -
Psa6g4874 157 Gene3D - 87 96 - -
Psa6g4874 157 PANTHER CYCLIN-D4-1-LIKE 65 151 - -
Psa6g4874 157 SUPERFAMILY Cyclin-like 73 151 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4874 Psa-Chr6 426294332 426295596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4874 76 154 Core Cell Cycle Gene Families AT5G10440 59.494 1.16e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4874 K18810 - gmx:100794010 170.629