Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4856 ATGTGTCGTGGTGATATAGCCCTCTCCCTTACCCTGTGTCAGTTATGTGTCCAAAATGCAATAAAAAGAATATCATCAGAGTGCCCTTCCTCCAAAGAAGCTGTAATTTGGTACGATAAATGCTTACTCCGTTATTTCAATGATTATTCCCTTGGTTATACATCAACTCCTAAATTTAACCAACTCAATATGGTCAACACTTCTAACCTCAACCTGCTTCAAAGCTTCACCACTTGGAAACTAGCAGATATTTTATCTGAAGTGCAAATTACAGGAGATAGTACTATAAAGAATTATGAAACAGGAGCTGTAAAATTGAATGATCGTCAAACCATTTACACTCTTGCTCAATGTACACCAGATCTGTCTGATCGGGATTGTAACTCTTGCTTGCAAAGAATTTTCCGAAATGAAATTCCTTGGAATAGTTTGGCAAGTCCAGAGGGAAAAATTCTATATCCAAGCTGCTATATGATGTTTGGATTGTCCCAATTCTATAACAACCGGGATGAACTGGAGGAGTTGGGGCATGTTAATCCTCCTCCAACAACTAAAGAAAATGTAAAAAGAAAGTCGCGAATTATCATAGTTGTTGTCCCGACCATCCTTTCGACAATACTGTTAACTTTTTCCTGCTATTTGCTAAGGAAAAGAGCAAGAAAGATCGGTCAGGAAAGTACCACTTTGGAGGGTTTGCAATTTGAAATGGCAGTAATTAAAACAGCAACAAACAACTTTTCACATGAACACAAGATTGGCGAAGGTGGATTTGGAAAAGTTTACAAAGGAATTCTTTCTGATGGAAGACACATAGCTGTTAAGAGGCTCTCATCAAGTTCAAATCAAGGCATAGTTGAGTTCAACAATGAAGTTTTATTGATAGCCAATTATTCTCGTCTCAAAGTCATACACCGTGATCTTAAATCAAGTAATGTTCTATTAGATGAAAATATGAATCCTAAAATATCAGACTTTGGCATGGCTAAAATGGTTCAAATAAATCAAGACCGGGGACATACAAACAAAATTGCTGGAACATGGGGTTACATGTCTCCGGAGTATGGAATTCTTGGACGATTTTCAGAGAAGTCAGATGTTTTTAGTTTTGGTGTCATTGTTTTAGAGATTATTACTGGAAAAAGAAATATAAGTCCTTATGACCGACACCATGTTGCAGAAGGCCTCACAAGTTATGTGAGTATGTTAACCTAG 1212 0.3713 MCRGDIALSLTLCQLCVQNAIKRISSECPSSKEAVIWYDKCLLRYFNDYSLGYTSTPKFNQLNMVNTSNLNLLQSFTTWKLADILSEVQITGDSTIKNYETGAVKLNDRQTIYTLAQCTPDLSDRDCNSCLQRIFRNEIPWNSLASPEGKILYPSCYMMFGLSQFYNNRDELEELGHVNPPPTTKENVKRKSRIIIVVVPTILSTILLTFSCYLLRKRARKIGQESTTLEGLQFEMAVIKTATNNFSHEHKIGEGGFGKVYKGILSDGRHIAVKRLSSSSNQGIVEFNNEVLLIANYSRLKVIHRDLKSSNVLLDENMNPKISDFGMAKMVQINQDRGHTNKIAGTWGYMSPEYGILGRFSEKSDVFSFGVIVLEIITGKRNISPYDRHHVAEGLTSYVSMLT* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4856 403 Gene3D Phosphorylase Kinase; domain 1 220 301 - -
Psa6g4856 403 ProSitePatterns Protein kinases ATP-binding region signature. 252 274 IPR017441 GO:0005524
Psa6g4856 403 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 296 399 - -
Psa6g4856 403 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 168 - -
Psa6g4856 403 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 182 295 - -
Psa6g4856 403 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 296 399 - -
Psa6g4856 403 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 8 168 - -
Psa6g4856 403 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 182 295 - -
Psa6g4856 403 ProSiteProfiles Gnk2-homologous domain profile. 1 50 IPR002902 -
Psa6g4856 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Psa6g4856 403 Pfam Protein kinase domain 301 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4856 403 Gene3D Transferase(Phosphotransferase) domain 1 302 400 - -
Psa6g4856 403 Gene3D - 1 49 IPR038408 -
Psa6g4856 403 Gene3D - 59 165 IPR038408 -
Psa6g4856 403 ProSiteProfiles Gnk2-homologous domain profile. 55 165 IPR002902 -
Psa6g4856 403 Pfam Salt stress response/antifungal 80 160 IPR002902 -
Psa6g4856 403 Pfam Salt stress response/antifungal 1 46 IPR002902 -
Psa6g4856 403 SUPERFAMILY Protein kinase-like (PK-like) 227 392 IPR011009 -
Psa6g4856 403 SMART serkin_6 246 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4856 403 ProSiteProfiles Protein kinase domain profile. 70 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4856 Psa-Chr6 425265272 425268006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4856 1 399 Receptor kinase-like Gene Family AT4G05200 35.537 2.53e-82 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g4856 Pkinase 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4856 - - gmx:100785282 344.739