Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4851 ATGTCAACCGGAAGGAAAGATATTGCTCTTGTTGTATTCTCACCTGGTGAGAAAGTGTTTTCCTTTGGTCACCCACATGTTGATACAGTCATAGATCGTTATCTATCACGGGTCCCACCCCAAATTAATGGCACCATGCAATTTCTTGAGGCTCACCGTAGCGCAAACGTGTGTGAGCTCAATAATCACCTGACAGAAATTAACAATATGTTGGATATTGAGAAGAAGTGTGGTGATGAGTTAAGCCATTTGTGA 255 0.4196 MSTGRKDIALVVFSPGEKVFSFGHPHVDTVIDRYLSRVPPQINGTMQFLEAHRSANVCELNNHLTEINNMLDIEKKCGDELSHL* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4851 84 PANTHER MADS BOX PROTEIN 6 83 - -
Psa6g4851 84 Gene3D - 5 59 IPR036879 GO:0003677|GO:0046983
Psa6g4851 84 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL23-RELATED 6 83 - -
Psa6g4851 84 SUPERFAMILY SRF-like 7 43 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4851 Psa-Chr6 421911996 421912375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4851 7 84 Type I MADS-box Gene Family AT5G60440 51.250 2.17e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4851 - - mtr:MTR_1g106070 127.487