Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4837 ATGCATATCTTCAAAACATCAACAACTGCAACAACTATCCAATTCATTCTACTTGCATCCTTGTTAACTTCACTTCCATTTCCATTTGAAGCTTCTCCAATATACAGCTACCACGCTTGCACAGAAACCTCTTATTACAAACCCAAATCAAATTTCCAAACCGCTTTAAAAACTCTTCTCTCTTCCCTCATCTCAAACTCCACCCTCCACAACGGTTTCTACACCGTCCATATCCCTCTCTTCAATTCCCCCAACGACTTAAAAGGACTCTTCCTCTGCCGTGCCGACACCACTCCCTCTATCTGTCAACACTGTGTAACTGCAGCAGCTAATAACATCACGAATTTGTGTAACAACCAGACAGAGTCTATCATCTGGTACGACGAATGTTTGCTGCGTTACTCCAATAATTCCTTCTTGAATCATATAGTTCCTGCAGTGACCTTGGAGTCTGATGAGAGTGTTCCTGATTCAGAAGTTTCCCAGTTCAGTGATTTCCTTGCAAAGCTTTTGAAGGATTTGGCATATGAAGCTGTGAATTCTCCTTCGGGTCATAAATTTGCTGCAAAAGAGAATTTCTTGGGTTCTATGAAGGTATATTCTTTGGCGCAGTGTACACCAGATTTGTCTGTTTTTGACTGTAACACGTGTTTGCAAGGTGCTATTAGTTCTATTGGAAATTGTTGTGATGGGAAAAGAGGTGCAAGATCACTTCTTCCGAGTTGTAATATTCGATATGAATTTTACTCTTTTTACAATGTTTCTGCTGTTTCTATTCAGCCACAACTTTCTCCTCCTTCTTCAGGAAAGAGCAACGTCGCTATGATTATTGGGATTGTTGTCGCAATTGTTGTTGCTGTGGTGCTTCTCATTATCGGCTGCTATTTCTTGCGTAAGAGGGCAAGGAGGAAGTATAACTATGATACTACATTCATCCAGGGTTCATCTTCAATTCGGAGGGAGGATCTTACTGATATAGACTGTTTGCAATTTGACTTTGCAACAATTGAAGCTGCCACAAATTGTTTCTCGGATGAGAACAAGATTGGCCGAGGTGGATTTGGTGTGGTTTATAAGGGTATCCTTCCGGACGGACATGAGATAGCGGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCAATAGAGTTCAAAAATGAAGTTTCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGAATGTTTGGATTTTGTTTGGAGGGGAGGGAGAAGATTCTTGTCTATGAATACATACCAAATAAAAGCCTTGATCATTTTCTATTTGATCCTGCTAAGCAAAGGGATTTAGATTGGTCAAAACGCTACAAGATTGTAGTTGGCATAGCTCGAGGGATTCTTTATCTCCATGAAGACTCCCAGCTTAGAATTATTCATCGTGATCTCAAAGCAAGCAATGTTCTATTAGACGAAAATATGAATCCAAAGATTTCAGATTTTGGGATGGCAAGAATTTTTCAGGCTGATCAGACTCAAGTAAATACACGACGAATAGTGGGGACTTACGGTTACATGTCTCCAGAATATGCAATGCGCGGACAATTTTCTGTGAAGTCAGATGTGTTCAGTTTCGGTGTCTTAGTTTTGGAAATTGTAAGTGGCAAGAAGAATACTGATTCAAATCAATGGAATGATGCTGATGATGACCTCTTAAGCTATGCTTGGAAAAAATGGTCAGAGCAAACACCATTGGAGTTACTTGATCCAATGCTGCGCGAATCTTATTCAAGAAACGAAGTTATGAGATGCATCCATATCGGTTTATTGTGTATTCAGGAAAGTCCACATGACAGACCTTCCATGGAAACTGTTGCACTTATGCTCAACAGTTATTCAGTTACGCTGTCATTACCTCGACAGCCACCGTCTTTCTTCCGTGGAAGAACACCTGACAGAATAAAACAAGGGTTTAATTCTGATCAGTCGACCACTGGATCAATTCCATGGTCTGTAAATGATGTATCCATTACTGAAGTTCACCCTCGATAA 2010 0.4055 MHIFKTSTTATTIQFILLASLLTSLPFPFEASPIYSYHACTETSYYKPKSNFQTALKTLLSSLISNSTLHNGFYTVHIPLFNSPNDLKGLFLCRADTTPSICQHCVTAAANNITNLCNNQTESIIWYDECLLRYSNNSFLNHIVPAVTLESDESVPDSEVSQFSDFLAKLLKDLAYEAVNSPSGHKFAAKENFLGSMKVYSLAQCTPDLSVFDCNTCLQGAISSIGNCCDGKRGARSLLPSCNIRYEFYSFYNVSAVSIQPQLSPPSSGKSNVAMIIGIVVAIVVAVVLLIIGCYFLRKRARRKYNYDTTFIQGSSSIRREDLTDIDCLQFDFATIEAATNCFSDENKIGRGGFGVVYKGILPDGHEIAVKRLSVTSLQGAIEFKNEVSLVAKLQHRNLVRMFGFCLEGREKILVYEYIPNKSLDHFLFDPAKQRDLDWSKRYKIVVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMARIFQADQTQVNTRRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDSNQWNDADDDLLSYAWKKWSEQTPLELLDPMLRESYSRNEVMRCIHIGLLCIQESPHDRPSMETVALMLNSYSVTLSLPRQPPSFFRGRTPDRIKQGFNSDQSTTGSIPWSVNDVSITEVHPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4837 669 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4837 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Psa6g4837 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 667 - -
Psa6g4837 669 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Psa6g4837 669 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Psa6g4837 669 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Psa6g4837 669 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Psa6g4837 669 Gene3D - 148 251 IPR038408 -
Psa6g4837 669 Gene3D - 33 139 IPR038408 -
Psa6g4837 669 Pfam Protein tyrosine and serine/threonine kinase 346 612 IPR001245 GO:0004672|GO:0006468
Psa6g4837 669 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Psa6g4837 669 CDD STKc_IRAK 349 616 - -
Psa6g4837 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 667 - -
Psa6g4837 669 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Psa6g4837 669 SUPERFAMILY Protein kinase-like (PK-like) 329 637 IPR011009 -
Psa6g4837 669 SMART serkin_6 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4837 669 Gene3D Transferase(Phosphotransferase) domain 1 419 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4837 Psa-Chr6 421358760 421361537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4837 4 669 Receptor kinase-like Gene Family AT4G05200 48.180 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g4837 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4837 - - cam:101512516 1012.29