Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4835 ATGGTTACCAAACTAACACTACAACTTCTTCTCACCACTCTAATCTTAACCACGACAAAAACCTCTGCATCTGTCTTCAACAACGTTACCTGCACAAACACCAAAACATTCTCACCAAACACCACTTTCCATTCGAATCTCAAAACCCTTCTCTCCTCCCTCTCTTCCAACGTAATCAACGATGTTAGATTCTTCCACACAACCTCAGGAAAAGACTCAGACAAAGTCTATGGTCTCTACATGTGTCGTGGCGATGTTCCATTCGCTTTATGCAGAGAGTGTGTTGGCTTTGCGACGCTTAAGATTCCATCCTCGTGTCCTTCTTCAAAAGAAGCTGTTATCTGGTACAACGAGTGTTTGTTGAGATATTCCTATAGGTTCATCTTCTCCAAAATGGAAACATGGCCTAGATACAAGATCGAGATTCCAATGGGGGACCCTGGTTTGTTACAGAGTAGAGGCTTTTATGCTGGTTTGAGATCTGTATTGAATGAACTTCCGAAAGAAGCTGCGGTTTCTCTTTCTGGTTTTAACAAATATGCTGTTAAGCAAGAAAATGCTTCTGTTAGTGTCACGCTTTATGGTCTTGCTCAGTGTACGCCGGACTTGTCGGCTGGGGATTGTAGGCGGTGTGTCGATGACGCGGTGGAGGAGCTTCCTAAGGCTTGTTGTGGTGGTAGCATAGGTGAAACTGTTTTGTTTCCGAGCTGTTTTGTTAGGTATGAGACTTATCCGTTTTATCAGCATTCAGGAGCTTCTGCATCAATAACAACTTCAGTTAATGGAGGAAGAAATATTCCAACACATGTGATTGCCATCATTGTTGTTTTAGTTGTCATTTTGGTGGCGATTTCTTGCATTGGCTGCTGTTTGTTATGGATCAAATCGAAGAAGACACGCAAGGCCAGTGACAGAGAAAATCTTGTGCTCGAATTTAATAACTCGGAGTCACTGGAATTCGATTTCGCTACAATTGAAATGGCAACAAGCATGTTTTCTGAAGATAGCAAAATAGGCAAAGGTGGATATGGACAAGTTTACAAGGGAATTCTTCCTTGTGGACAAGAAATAGCTGTGAAAAGACTGTCCAAAACTTCAGGTCAAGGAGCAGAAGAGTTCAAAAATGAAGTCATGTTAATAGCCAAACTTCAACACAGAAATTTGGTGAGATTAATTGGATTTTGCCTTGAAGAACAAGAAAAGATACTTATCTATGAATATGTGCCTAACAAAAGTCTTGATCACTTCCTATTTGATTCTAAGAAGCAAAAACAATTAACTTGGCCCGAACGGTATAGTATCATAAAAGGGATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCTCGTCTCAAGATTATACATCGTGATATTAAACCAAGCAATGTTCTTCTAGATAACAATATGATTCCGAAAATATCTGATTTTGGCATGGCAAGGATGGTAGATATAGAGCAAATCCAAGGATATACAAATAGAGTTGTGGGCACATACGGTTACATGTCTCCAGAATATGCAATGCACGGACAATTTTCAGTAAAGTCTGATGTTTTTAGTTTTGGAGTTATGGTTCTTGAGATTATTAGCGGAAAAAAGAATTCATGTACATTTGAATCGTGTCGTATTGACGATCTCTTGAGTTATGCTTGGAACCAATGGAAAGGTGAATCACCATTTGAGATGTTGGATCCAATAATGCAAGAATCTTATGCTCCAAATGAAGTAGAAAAGTGTGTGCAAATTGGTTTATTATGTGTCCAAGAAAATCCAGATGATAGGCCTACAATGGGAACAATTGTTTCATATCTTAATAATGTCTCAATTGATATGCCATTTCCTATGGAACCGGCATTTTTCATGCATGGCAGAACAAGAAGAAATTCAGCTGAACATCAATCATATTCAGGTCACTCCACCAACCATTCTTTCTCCTCAAGTGTACGCCCTCGATAG 1953 0.3943 MVTKLTLQLLLTTLILTTTKTSASVFNNVTCTNTKTFSPNTTFHSNLKTLLSSLSSNVINDVRFFHTTSGKDSDKVYGLYMCRGDVPFALCRECVGFATLKIPSSCPSSKEAVIWYNECLLRYSYRFIFSKMETWPRYKIEIPMGDPGLLQSRGFYAGLRSVLNELPKEAAVSLSGFNKYAVKQENASVSVTLYGLAQCTPDLSAGDCRRCVDDAVEELPKACCGGSIGETVLFPSCFVRYETYPFYQHSGASASITTSVNGGRNIPTHVIAIIVVLVVILVAISCIGCCLLWIKSKKTRKASDRENLVLEFNNSESLEFDFATIEMATSMFSEDSKIGKGGYGQVYKGILPCGQEIAVKRLSKTSGQGAEEFKNEVMLIAKLQHRNLVRLIGFCLEEQEKILIYEYVPNKSLDHFLFDSKKQKQLTWPERYSIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNNMIPKISDFGMARMVDIEQIQGYTNRVVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSCTFESCRIDDLLSYAWNQWKGESPFEMLDPIMQESYAPNEVEKCVQIGLLCVQENPDDRPTMGTIVSYLNNVSIDMPFPMEPAFFMHGRTRRNSAEHQSYSGHSTNHSFSSSVRPR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4835 650 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Psa6g4835 650 ProSiteProfiles Gnk2-homologous domain profile. 137 246 IPR002902 -
Psa6g4835 650 CDD STKc_IRAK 338 605 - -
Psa6g4835 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Psa6g4835 650 MobiDBLite consensus disorder prediction 629 650 - -
Psa6g4835 650 SUPERFAMILY Protein kinase-like (PK-like) 317 634 IPR011009 -
Psa6g4835 650 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Psa6g4835 650 Pfam Salt stress response/antifungal 154 244 IPR002902 -
Psa6g4835 650 Gene3D - 24 127 IPR038408 -
Psa6g4835 650 Gene3D - 150 246 IPR038408 -
Psa6g4835 650 MobiDBLite consensus disorder prediction 631 650 - -
Psa6g4835 650 SMART serkin_6 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4835 650 Pfam Protein tyrosine and serine/threonine kinase 335 603 IPR001245 GO:0004672|GO:0006468
Psa6g4835 650 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Psa6g4835 650 Gene3D Phosphorylase Kinase; domain 1 293 407 - -
Psa6g4835 650 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 628 - -
Psa6g4835 650 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 628 - -
Psa6g4835 650 ProSiteProfiles Protein kinase domain profile. 332 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4835 650 Gene3D Transferase(Phosphotransferase) domain 1 408 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4835 Psa-Chr6 421344040 421347815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4835 14 649 Receptor kinase-like Gene Family AT4G05200 44.733 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g4835 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4835 - - gmx:100791642 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4835 6 421344040 421347815 Psa6g4835 6 421344040 421347815 ECH