Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4802 ATGAGCCGCCCTAGAAACAATCTCAGATTTGACGATGCATTACAGTTTGCAATGGAAGTAAATGATACATTGAAATATAAGAGGGGAAAATTCGCTGAATTCTTAAAAATCCTAAACGATTTCAAAGCCATAAGAAATGACCTTGAATATGTCAAAGAAAGAGTGATGGAGCAGTTTAAAGAGCACGTCAAATTACTTTTGGGAATCAACGCCTTCATGCCACCGGGACATGGAATCCCACTTCCATCGAATGATGAACAACAAAGTGATAATGAAGAATCAGGAATCAATATGTGGTGTCATAGAAATACTTTCACTATTAGGATATCCGAAACAAGGCTTGAGGAGGGAGTTAATGTGTTCACATGGAAACAACTTTTGTAA 384 0.3724 MSRPRNNLRFDDALQFAMEVNDTLKYKRGKFAEFLKILNDFKAIRNDLEYVKERVMEQFKEHVKLLLGINAFMPPGHGIPLPSNDEQQSDNEESGINMWCHRNTFTIRISETRLEEGVNVFTWKQLL* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4802 127 ProSiteProfiles PAH domain profile. 6 76 IPR003822 GO:0006355
Psa6g4802 127 PANTHER PROTEIN, PUTATIVE-RELATED 5 88 - -
Psa6g4802 127 SUPERFAMILY PAH2 domain 5 75 IPR036600 GO:0006355
Psa6g4802 127 Gene3D Paired amphipathic helix 5 76 IPR036600 GO:0006355
Psa6g4802 127 PANTHER SIN3B-RELATED 5 88 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4802 Psa-Chr6 419191955 419192338 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa6g4802 PAH 9.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4802 K23213 - mtr:MTR_1g104940 83.9593