Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4801 ATGGATTCCTTCAGTTTGCTGTTTCTACTTGCAACTTTCTCTTCCCTTTTTGTCCAGTGCTCTTCTTCTCCCGTCTTGCAAGCTGCTCTTGATAATAGCACACGTGCTTACTATAACTGCACAAAGAACAGCACTTCTGCAACGTATAACACTTACCGTTCCAACATCAAAACACTCCTGGGTTTGCTCTCCTCCAATAGTAGTAACAATGCCAGATTCTACAACGCCACGGTTGGTAGCGATAACAACGTGGACACTGTCTACGGTCTCTTCCTTTGTGTTAGAGACATTGACCCCAAAATCTGCAACATGTGTGTGATAGAAGCAGCCAAACTCATATCATCACTCTGCGCCACTGCAAAAGAAGCCATAGTTTGGTACAGAGTGTGCTATGTGCGTTATTCTGATAATAGCTTCTTTTCCTTCGTTGAGAAAACTCCAGAACTTTCTTTCATGAACGATAATGATTATGTCGGTCAGGTTGGACGCTTCAACAACATTCTTTGGGATATGTTGAACGATTTGAGAAATGCAGCAGCAAATTCTTCTGCTAAGTCGGCTGACAACTCGGCGAATCTCACAGAAAACCAAAAACTATATGCCTATGCTTGGTGCCTCCCATACCTATCTTCAGAGAACTGCAGCTGGTGTCTTAGCGATGCCATAGCAGAAGTTCCAACCAGTTGCTGCAGAGGAAAATCTGGAGGCACAATATTGTATCCCAGTTGTGGTATTAGATTCGAATTATATCCATTCCACAAGATACGCGACAGTATTTCTTGGGTGCAACCGTCACCCACAAGTCCTCGCTCTTTAGCTCCACCAGGAAAACAGAAGACAATAACAATATTTGAGATCATTGTTCCAACTATTGTTTTAATGGTGCTTTTAGTCTTGGGATACTGTTGCTTTCTATATAGGAAAGGAAGAAAGAGCAAGCATGATATTCTCAAAGAAAGCTTTGGAAATGACATTACCACTTTGGAGTCCTTGCAATTCGAATTTGCCCAAATTGAAGCAGCAACAAACAGGTTTGCTGCAGCAAACAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACAAGGGAATTCTTTCGGATGGACAAGAAATTGCTGTGAAGAGGCTTACAAGAAGCTCTGGACAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACACCGAAATCTAGTGAGATTACTAGGATTTTGTTTGGAAGATGAGGAGAAAATACTTATCTATGAGTATGTGCCAAACAAGAGTCTTGATTACTTTTTATTTGATCCCCAGAAGAGAAAGCTGCTATCTTGGTCTCAACGTCAGAAGATCATTAAAGGAATTGCCCGTGGAATTCTATATCTTCATGAAGATTCTCGCCTAAAAATAATACATCGTGATCTGAAACCTAGCAATGTCTTGTTAGATAGTAATATGAATCCAAAAATATCAGATTTTGGCATGGCTAGAATTGTATCTATAGATCAAATTGAAGAAAGCACATGCACGATTGTAGGGACATATGGCTATATATCTCCAGAATATGCAATGCACGGATACTTTTCTGTGAAATCCGACGTGTATAGTTTCGGAATCATGGTTTTAGAGATTATTAGTGGAAAGAGGAAAGGCTGCTCTACTGAATCAGAGTGTATTGATGACATCCGGAGATATGCATGGACAAAATGGGCAAAGCAAACACCACTTGAACTAATGGATTCTAGTATAGAAGGAACTTACTCCCAAGAAGAAGTCATCAAGTACATCCACATTGGTCTGTTATGTGTTCAGGAAGATCCAGATGAAAGACCTACAATGGCAACAATTGCGTTCTACCTGAACAGCTCTTCGATCAACTTGCCATCCCCTCTTGAACCACCGTATTTTAAGCGTAGCGGAAATGAAGAAAACGTGGCCCCCAACAAAGAATCAACCAATATTGGTGACTCAACCAACGGAATCACTATTACTCAATTCTTTCCTCGTTAA 1998 0.4069 MDSFSLLFLLATFSSLFVQCSSSPVLQAALDNSTRAYYNCTKNSTSATYNTYRSNIKTLLGLLSSNSSNNARFYNATVGSDNNVDTVYGLFLCVRDIDPKICNMCVIEAAKLISSLCATAKEAIVWYRVCYVRYSDNSFFSFVEKTPELSFMNDNDYVGQVGRFNNILWDMLNDLRNAAANSSAKSADNSANLTENQKLYAYAWCLPYLSSENCSWCLSDAIAEVPTSCCRGKSGGTILYPSCGIRFELYPFHKIRDSISWVQPSPTSPRSLAPPGKQKTITIFEIIVPTIVLMVLLVLGYCCFLYRKGRKSKHDILKESFGNDITTLESLQFEFAQIEAATNRFAAANRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDEEKILIYEYVPNKSLDYFLFDPQKRKLLSWSQRQKIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVSIDQIEESTCTIVGTYGYISPEYAMHGYFSVKSDVYSFGIMVLEIISGKRKGCSTESECIDDIRRYAWTKWAKQTPLELMDSSIEGTYSQEEVIKYIHIGLLCVQEDPDERPTMATIAFYLNSSSINLPSPLEPPYFKRSGNEENVAPNKESTNIGDSTNGITITQFFPR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4801 665 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Psa6g4801 665 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Psa6g4801 665 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Psa6g4801 665 Gene3D Transferase(Phosphotransferase) domain 1 421 623 - -
Psa6g4801 665 Pfam Protein kinase domain 348 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4801 665 Gene3D - 148 252 IPR038408 -
Psa6g4801 665 Gene3D - 32 139 IPR038408 -
Psa6g4801 665 Gene3D Phosphorylase Kinase; domain 1 308 420 - -
Psa6g4801 665 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 665 - -
Psa6g4801 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Psa6g4801 665 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 665 - -
Psa6g4801 665 SUPERFAMILY Protein kinase-like (PK-like) 331 638 IPR011009 -
Psa6g4801 665 SMART serkin_6 345 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4801 665 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Psa6g4801 665 CDD STKc_IRAK 351 617 - -
Psa6g4801 665 ProSiteProfiles Protein kinase domain profile. 345 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4801 665 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4801 Psa-Chr6 419110976 419114383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4801 25 636 Receptor kinase-like Gene Family AT4G05200 47.191 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g4801 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4801 - - mtr:MTR_1g105585 1001.12