Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4782 ATGGTGAGGGTTAGTGTGTTGAATGATGCTCTCAAAAGCATGTACAATGCTGAGAAACGTGGGAAGCGTCAAGTTATGATTAGGCCATCCTCAAAAGTGATTATAAAATTCCTTATGGTCATGCAAAAGCATGGTTATATTGGGGAGTTTGAGTATGTTGATGATCACCGGGCTGGTAAAATTGTTGTGGAGTTGAATGGAAGGTTGAACAAGTGCGGTGTTATTAGTCCTCGTTTTGATGTTGGTGTTAAGGAGATTGAGGGATGGACTGCTAGGCTGCTTCCTTCAAGACAGTTTGGATACATTGTCTTGACTACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGCCGGTGGTAAAGTGTTGGGTTTTTTCTATTAG 393 0.4198 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNAGGKVLGFFY* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4782 130 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Psa6g4782 130 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Psa6g4782 130 SUPERFAMILY Ribosomal protein S8 4 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
Psa6g4782 130 Hamap 30S ribosomal protein S8 [rpsH]. 2 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Psa6g4782 130 Pfam Ribosomal protein S8 7 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Psa6g4782 130 PANTHER BNAA02G06730D PROTEIN 1 130 - -
Psa6g4782 130 Gene3D - 70 130 - -
Psa6g4782 130 Gene3D - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4782 Psa-Chr6 417407732 417410107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4782 1 130 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.923 6.85e-93 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4782 K02957 - gmx:100814599 259.225