Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4771 ATGCAGCACTTCAAAATCTCTGCCACTGCATATGTTTTCCTTTCCTTTGCTCTAATTATAGCTACAACAACAACTCAAGCAGCTACAGATCTATCTTTCATTCAGAATTACTGTCCAAATACAACCACTTTTTCTCCAAACACAACCTATCAAACTAACCTCAACAAGCTTCTTTCTCTGCTTACATCAAATTCCACCAACAAAAATGGCTTCTACTACACCACCGTCGGCCAAAACAACCCCGGAAACACCGTATACGGTGCCTTCCTCTGCCGTGGAGATCTCACAACAAAAGAATGCCAAGACTGTGTTTCCGTAGCATCCAATCAAATCCTTCAAAAGTGTCCTACAGAAAAAGAATCCGTTATTTGGTTAGCTGAATGCATGCTACGTTACTCAAACCTTGCTTTCTTCGACGTAGCTGCAGAAGTTCCTGTAATTCCTCTCTGGAACACTGCAAGTGTGACGGAGGAAAGCCGGTTCATGCAACTATTAGCTGATACAATGAACGCTGCAACGGCAGAGGCGGTGAATGGTGGAGGTGACAAAAAGTTTGGAACTAAAAAAGCAATTTTTACTAGCTTTCAAACTTTGCATACACTTGCACAGTGTACACCGGATTTGTCAAAGTCAGGATGTGAAAAATGCCTTACAATAGCAACTACTGCATTACCCTCTTGCTGTAATGGACAACAAGGTGCAAGAGTGCTTATTCCTAGTTGTAATATTAGGTACGAGCTTTATCCGTTTTATCACGAGTCGAATGTTCCTGCTCCTGCAGAACCAAGGCCAAATCCACAAGGCACTGTCGAAGGAAAAAAATCACGGAACTCGGTTGTGATAATTGCTGCAATAGTATCTCCGGTTGTGAGTATCTTATTGCTTACACTGTTAGTCTTATGGATCATATCTGAAAAGAAAAGAAGAAAATTCAATCCAGTGCCTGTGCCTGAAGAAAGCGGTATGGCTAAAAAAGTAACTGTTTTGTATCTTCTAATTAGTTCCCTTTTATGCAGTATTTTTGAGTCTGCTAACATATTTTATTCTGCAGTTGAAATCTCCAGAGTAGAATTCTTGCAATTTGATTTTGATACTATTGTAGCGGCCACAAACAACTTCCGCGATGACAATAAATTGGGGGAAGGAGGATTTGGCGAGGTTTACAAGGGTATGTTATTTAATGGACAAGAGATTGCTGTGAAGAGGCTATCAAGAAGTTCTGGTCAAGGCATAGACGAATTCAAGAACGAGGTAGTTTTGGTAGCAAAACTACAACACCGAAATCTTGTTAGGATTCTTGGTTTTTGCTTGGACGGGGAAGAAAAGATGCTTGTTTATGAATTCATGCCGAACAAAAGTCTAGACTATTTTCTATTTGATCCTGAAAAAGCACGTCAGATGAATTGGCCAAGACGATACAAGATAATAGAGGGAATTGCGCGAGGAATACTTTATCTTCATGAAGATTCTCGACTTAGAATCATACATCGTGATCTTAAAGCTAGTAATATATTATTAGATGAGAATATGGATCCTAAAATTGCTGATTTTGGGATGGCAAGAATTTTCGGCGTTGATCAAACCCGAGGAATCACAAATAGAGTTGTTGGAACATTCGGTTACATGTCTCCAGAATATGCAATGCACGGAGAGTTTTCTATCAAAACAGACGTGTATAGCTTTGGAGTCCTTGTTCTCGAGATAATTACGGGAAAGAAGATCACATCCTTCCGCGCATCAGGCTATGCCGAGGACCTCTTGAGCTACGTTTGGAAAAAATGGAATGATGGAACACCAATGGAGCTACTTGACATGACATTGAGAGATTCATACTCAAGAGTTGAAGTAACAAGATGCATCCATGTTGGGTTAAGTTGTGTTCAAGAAGATCCAGATCAAAGACCATCTATGCAGACAATAGTTTTACTGCTAAGTAGCCATTCTGTTACTCTTGAACAACCTCAACGACCAGCAGGTTATATCAGTAGCAAATCTGATCAAAGCATTTCGAGAAATGAATTTGAGAATTCAGAAAAGTCTACAACTACAAGCAAATCAGCTACACTTTCTGTTGATGAAGCATCCATTACTCAGGTGTACCCTAGATAG 2109 0.3997 MQHFKISATAYVFLSFALIIATTTTQAATDLSFIQNYCPNTTTFSPNTTYQTNLNKLLSLLTSNSTNKNGFYYTTVGQNNPGNTVYGAFLCRGDLTTKECQDCVSVASNQILQKCPTEKESVIWLAECMLRYSNLAFFDVAAEVPVIPLWNTASVTEESRFMQLLADTMNAATAEAVNGGGDKKFGTKKAIFTSFQTLHTLAQCTPDLSKSGCEKCLTIATTALPSCCNGQQGARVLIPSCNIRYELYPFYHESNVPAPAEPRPNPQGTVEGKKSRNSVVIIAAIVSPVVSILLLTLLVLWIISEKKRRKFNPVPVPEESGMAKKVTVLYLLISSLLCSIFESANIFYSAVEISRVEFLQFDFDTIVAATNNFRDDNKLGEGGFGEVYKGMLFNGQEIAVKRLSRSSGQGIDEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLVYEFMPNKSLDYFLFDPEKARQMNWPRRYKIIEGIARGILYLHEDSRLRIIHRDLKASNILLDENMDPKIADFGMARIFGVDQTRGITNRVVGTFGYMSPEYAMHGEFSIKTDVYSFGVLVLEIITGKKITSFRASGYAEDLLSYVWKKWNDGTPMELLDMTLRDSYSRVEVTRCIHVGLSCVQEDPDQRPSMQTIVLLLSSHSVTLEQPQRPAGYISSKSDQSISRNEFENSEKSTTTSKSATLSVDEASITQVYPR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4771 702 ProSiteProfiles Protein kinase domain profile. 373 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4771 702 Gene3D - 30 137 IPR038408 -
Psa6g4771 702 Gene3D - 145 250 IPR038408 -
Psa6g4771 702 Gene3D Transferase(Phosphotransferase) domain 1 449 659 - -
Psa6g4771 702 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 701 - -
Psa6g4771 702 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Psa6g4771 702 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 34 701 - -
Psa6g4771 702 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Psa6g4771 702 SUPERFAMILY Protein kinase-like (PK-like) 358 668 IPR011009 -
Psa6g4771 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Psa6g4771 702 Gene3D Phosphorylase Kinase; domain 1 340 448 - -
Psa6g4771 702 SMART serkin_6 373 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4771 702 MobiDBLite consensus disorder prediction 654 702 - -
Psa6g4771 702 CDD STKc_IRAK 379 641 - -
Psa6g4771 702 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Psa6g4771 702 Pfam Salt stress response/antifungal 38 134 IPR002902 -
Psa6g4771 702 Pfam Salt stress response/antifungal 156 248 IPR002902 -
Psa6g4771 702 Pfam Protein tyrosine and serine/threonine kinase 376 642 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4771 Psa-Chr6 416784128 416787693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4771 4 702 Receptor kinase-like Gene Family AT4G05200 49.302 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g4771 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4771 - - cit:102622618 733.021