Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4744 ATGAATGTTGCTGCAAGTTTTGAGGCACATGATTCTGAGTTCATAGAAGTTGATCCTACAGGAAGATATGGAAGATACAATGAAATTCTTGGCAAAGGAGCTTCCAAGACAGTGTATAGAGCATTTGATGAGTATGATGGAATAGAAGTAGCATGGAATCAAGTAAAGCTTTATGATTTTTTGAAAAATCCTCAAGACCTTGAGAGATTATACTGTGAAATTCATCTTCTCAAGACATTGAAGCATAAGAACATCATGAAGTTCTACACTTCTTGGGTTGATACTACCAATAGACACATAAACTTTGTCACTGAGATGTTCACATCTGGGACTTTAAGACAGTACAGACTTAAACACAAAAAAGTTAACATAAGAGCTGTTAAGCATTGGTGCAGACAGATTTTGGAAGGTCTCCTCTTTCTCCATAGCCAGGACCCTCCTGTGATCCATAGAGATCTCAAATGCGATAACATTTTCATCAATGGTAACCAAGGAGAAGTCAAAATCGGTGACCTTGGCCTTGCTGCAATTCTCCGCAGATCAAATGCTGTTCACTGCGTTGGAACACCCGAGTTTATGGCTCCGGAAGTGTATGAAGAACATTACAACGAATTGGTTGACATATACGCTTTCGGAATGTGTATATTGGAGATGGTCACCTTTGAGTATCCTTATAGCGAATGCAACCATCCGGCTCAAATTTACAAAAAAGTTGTCTCTGGAAAAATGCCAGAATCACTTTACAAAGTAAATGATCTAGAGGTTAAGCAGTTTGTAGAGAAATGCTTGGCAACTGTATCCCTTAGGCTTTCAGCCAGGGAACTCTTAGATGACCCTTTTCTCCAAATTGATGATTATGGATCTGAGTTAAAAGAATTTCAGTATCAAAGAGGTTGCTATGAAGTAAAACCAACAATTAGACAAACGGTGAATGGAAGTTATAGCAATAGCTTAATGAGTTTGTACACTGATAATTCTGGTGGTTATCACAATGATTTTGATCTCTTTGATTGTGAAGAGGATGATAATTTGGATGAAGTTGACACCTCAATCAAAGGTAGGAGAAGAGATGATGGCATCTTTCTGAGAATCAGAATACCAGATAAAGAAGGTCGAGTTCGAAACATCTACTTCCCGTTCGACACGGAGACTGATACCGCATTGAGTGTTGCATATGAAATGGTAGCCGAGCTTGACATAACTGACCAAAATTTAACAAAATTAGCAAACATGATAGATAATGAAATTGCAACTTTGGTACCGGGATGGAAAATGGGACCAAGAATTGATGAAGTTTCAGAAGCTTCAAGCGCAAGTTTCTGTCTCAACTGTGCTGCAAACAATACCTTAGTTGATTATGTATCATCGAATAGTCCATGTGCCAAGAAGCTTCAATTTTTCCATTGTTCTAAAAATGGATGTGCCGCGGTTCACGGCCGATTCGAGGAGATTACATATCAATATGAAGGGTCTGCAAACACTGCTACAGAAGGTGAACCGCCAAGTCAATCCAATGGCATTCATTATGCAGATATTTGCGGTCAGCGAGACGAACGAGAGTCAAATCATGAAGAATTGAAAGACATTCATTGTGATAAATCTCATGAGATATCTAAACTATCACTCATAAAGGAGGATGAAGAGGAGAATAGCGACCAAATTTATCTTAATACCAAAAAGCCTCCTTCTAGCCCTGCAGCATCAGAATGTTCATTATTCTTGGACTATGAAAATGATATAAGGCATGAACTACGATGGCTCAAAGCAAAGTACCAAATGCATTTAAGAGATCTTAGAGGCCATCAACTAGGTAGTAGTAGTAGTAGTACTAAACCAAAATCTACTTGCACATCTCCTGAAAAATTACAAAATAATAACTCATTATCGATGTCTATCGCTTATAAGAATTTTTCAGTCGATGCTGCAAAGCGCAACACTTTGGACGACCAAATTATTCCAAGTATTGCTTGTGATACAAGTCATCCTAACAATTCTCAACAAGTGGTCACGGCCAAGGATTTCTTTGCAGGAGCATTGCTTCCAAACTCGCTTCAAAGGGCAACCTCGCTTCCGGTCGATGCAGTTGATGTCTAG 2094 0.3887 MNVAASFEAHDSEFIEVDPTGRYGRYNEILGKGASKTVYRAFDEYDGIEVAWNQVKLYDFLKNPQDLERLYCEIHLLKTLKHKNIMKFYTSWVDTTNRHINFVTEMFTSGTLRQYRLKHKKVNIRAVKHWCRQILEGLLFLHSQDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRRSNAVHCVGTPEFMAPEVYEEHYNELVDIYAFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKMPESLYKVNDLEVKQFVEKCLATVSLRLSARELLDDPFLQIDDYGSELKEFQYQRGCYEVKPTIRQTVNGSYSNSLMSLYTDNSGGYHNDFDLFDCEEDDNLDEVDTSIKGRRRDDGIFLRIRIPDKEGRVRNIYFPFDTETDTALSVAYEMVAELDITDQNLTKLANMIDNEIATLVPGWKMGPRIDEVSEASSASFCLNCAANNTLVDYVSSNSPCAKKLQFFHCSKNGCAAVHGRFEEITYQYEGSANTATEGEPPSQSNGIHYADICGQRDERESNHEELKDIHCDKSHEISKLSLIKEDEEENSDQIYLNTKKPPSSPAASECSLFLDYENDIRHELRWLKAKYQMHLRDLRGHQLGSSSSSTKPKSTCTSPEKLQNNNSLSMSIAYKNFSVDAAKRNTLDDQIIPSIACDTSHPNNSQQVVTAKDFFAGALLPNSLQRATSLPVDAVDV* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4744 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Psa6g4744 697 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4744 697 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4744 697 CDD STKc_WNK 22 281 - -
Psa6g4744 697 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Psa6g4744 697 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4744 697 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 680 - -
Psa6g4744 697 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Psa6g4744 697 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Psa6g4744 697 MobiDBLite consensus disorder prediction 601 622 - -
Psa6g4744 697 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4744 Psa-Chr6 415309112 415313211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4744 1 484 MAP Kinase Kinase Kinase AT3G22420 58.397 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa6g4744 Pkinase 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4744 K08867 - gmx:100804179 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4744 6 415309112 415313211 Psa6g4744 6 415309112 415313211 ECH