Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4741 ATGGAACCGGGCACGAGAATAGCTAACCCTTCAGGGGTCGTGGTTAAGAATAGGAGCTCTTCGGGTTGCTTGATTGTTAGAAAGAAAGGAGATGGTTTGGGTGGTGACTCTTCTAGTTCGCGGAAACAATATGAATCTAAGAAAGTGAGGAAAAAGGTCAAGGAAGAGTCAAGTGATTCAGAATCAAGCGGGGAGTTACTTATGCCGCCTGTTAGGAGGCCCGGTCCTGAGACAATCCGAGTATGTAATAGTTTGAGTGCTCTTGAGCGAGGTGGTAATGTTGGGAGCAGTGAAATTAGTAGGAAGAGGGAGCGAATGGAGCAAATTAGGCGTAATGGTGATGACATGGTTGAGGGGAATGGCTTGGAGAGGAGGGACAAGAAAGTTAAGTTGGAAGTGTTTGATTTTGATGAATATGACGGAGCGGGTGTGGAAAGGATGAGAAGGAGGCAATTTGATGGTGACGGGGTTAGTTTAGGTGGAGGAAGGTTTATGGGAACAGTGCATTCTGGTAGAGGTAGCATTGATAGGGAATTTGAAAGTGGTTCAAGCAGACACATTGTGGATAAGAGAAAAAGTACCTATCACGACAGAGCAAGTGGATCGTATCTCGGAGATAGTGTTGACCATAGTAGGATAAAGGTGAAAAGGGAAGGAACTCAGCATCCTCCATCGTTGTTGAAGGAGAAGTTTAACTCTGATGAGTCCATTAGGGTTCAGGGGAAAAATGGTGTTTTGAAGGTGATGGTCAATAAGAAGAAGACGGGTGGATCAGTAGAACACTATGAACATCGGAAACCAGTAGAAAGTAGACATAGTGGAAGGGCTGAGGGCACTTCTAAGAGGAATATTCCGATACAACCTTCGTCACGCTTAGAAACAAAATCTGCCGAAAAACAGGGCGTACTTGTTAGGCCGGAGAAGAAACAGATAACAAGAAAATCACTCTCAAGCAAGGAGGACAGTAAGGGCGATGAGCAGGATTCCGATAACAATGATACATCAATGAATCTGGAAGTAAAAAATATTAAAGCTCACACATCTTCAAAAAAGATTACTTCTGAAAATGAACAGACTCCTGTACATGACAAGCTCCCAACAACAAAATCGAGTGAAGGGAAAATCAGGCGAGGTAGTGGCACAGAAAAGCAGAAACTAAGAGAACAAATACGGGAAATGCTTCTGAATAAAGGCTGGACCATAGACTATCGCCCACGAAGGAATAGAGACTATTTAGATGCAGTTTACATTAATCCTGGGGGAACAGCTTATTGGTCCATCATCAAGGCCTATGATGCACTTCAAAAGCAATTGATTGAGGATGACCAAGAGGCCAAGGCCAAAGGGGCGAGTTCTTCTTTTGCTCCTATCGCTGATGATGTGCTCAATCAATTGACAAGGAAAACTAGGAAGAAGATGGAGAAAGATTTAAAGATGAAGAAGAAGAAGCAAAGAGCTGATGACAATGATAGTGGAAAAGAACGGCAGATTAAAAGAACTGCTGGCAAAAAGCATCATATGAATGGCAATGATAGTGATAGCAATGAAGATAAGCTAAGCTCCTTTATCAAGCAAGGAGGTAAATCAGTGAAAACTAAATTGCCTGAAATTTCTGTTACCGGCGGTAACTCTAAAAGCCAGAATGCTACAACTGATAAATCATTTTCTGAAAGTGATCCCAAGCTCCTACATGGAAGGAAAAGTAGAAAACATGGAAGGTGCACTCTATTAGTTCGTAGTTCTAACAAGGGATTGAATTCCGAATCTGATGACTTTGTTCCATATACGGGAAAGCGAACAGTGCTTTCCTGGTTAGTTGACTCGGGGGTAGTACAGGTAAGTCAAAAGGTTCAGTATCGCAGGAGGAAGCGAGTAATGCTGGAGGGATGGATCACAAGAGAAGGCATTCACTGTGGCTGCTGTAGTAAGATCCTTACGGTTTCAAAGTTTGAGCTTCATGCAGGAAGCAAATTGCCACAACCATATCAAAACATATATTTAGATTCTGGAGTTTCTCTTCTACAATGTCAGATAGATGCGTGGGAAAAACAAGAGAATTCTGGGAAAATCAGTTTCCATTCGGTAGATGTTGATGGTAATGATCCAAATGATGATACCTGTGGTATATGTGGAGATGGAGGGGATTTAATCTGTTGTGATGGTTGTCCATCAACGTTTCATCAGAGTTGCTTGGATATACAGATGCTTCCCCCTGGGGATTGGCATTGTCCAAATTGCACCTGTAAATTTTGTGGACTAGCCAGTGGAAGTATTGACAAAGAAGATGATGCAACTGTATATGCCCTACAGACTTGTGATTTGTGCGAGAAAAAATATCATGACTGCTGTACTAAGGATGTGAGTGCCCTGCATGCCAACTCCAATATGTCAGGGCATTCCTTTTGTGGAAAAAGTTGCAAAGAGCTTTTTGAGCACTTGAAGAAGTACCTTGGTACCAAGCATGAACTTGATGCAGGCTTTACATGGTGTCTTGTTCGTAGAACAGACAATGATTCGGAGGCAGCTAGTAGGGGAGTTACCCAGAGGGTGGAATGCAACTCCAAGCTGGCTGTTGCACTGACTGTGATGGACGAATGCTTTTTACCTGTTGTTGATAGAAGGAGTGGGATCAATTTAATCCATAATAGTTTATATAATAGCGGGTCAAATTTCAATCGGTTGAATTACACTGGCTTTTATACTGCTATTTTGGAGCGGGGGGATGAAATAATATCTGCAGCATCTATCAGGTTCCATGGGACTAAGTTAGCAGAAATGCCATTCATTGGAACTCGCCATATATATAGGCATCAGGGAATGTGCCGCCGGCTTTTTTCTGCCATTGAACATGCTCTCTGCTCTTTGAAGGTTGAGAAACTGGTCATTCCTGCAATTTCTGAACTTGTTCATACATGGACAACAGCGTTTGGCTTCACACATCTCGAGGAATCGCTCAGGCAAGAAATGAGGTCATTGAATATGTTGGTATTCCCTGGTATTGATATGTTACAGAAGCTTCTAGTGGAGCAAGGAAAACTTGATGATGCTGAGCAATTCGAGAATGGCGGCGTGGTTTCTGTTAATCCCACTGTGGTCAATAGGTTAGGTATTGATTCTTTGGCTTTGCAAGATCCCCATGAAAGTGAGGATGCTAGCTCCAATCCTGCCAATAAGATTAACACTGAATGCAGTGATGCTTCTCAGGATATAAGCAGTCAAGGTTTGACTGGCAGGACTGTATGCTCCAAATCTCATTCTGAAGAAAGATTATCTGATTCTGTTTCAGAAAACTGTGCTTCTCCTTCTAATTCTAGTCATGGCGTACTCAAAAAGAAAAAGAAAATATCGACGTCTTCTCCTATCGATGATATGTCACCCAAATGTCTACTCATTTCACCAAATGGCAAATCTACAAATGGCCTTCCATCGGATCCCTCAGATTGCCATGAACTTCCAGCTTTGTGTCAAGCTACTGCGTGTTCTGACCTAGGTACCATAAAAATTGAACCTGTTTCTGACGGGAAACTCCATGCTATTACCGATATGAATTGTGGTTTGCCGGGGCTTGCCCGAAATCCTGTGTTGGATTCTCAAGTGGTGGATAATGCTTTGCCTTCTAAAGAGTTTGATATGAATGATGCCCAAGTTGAGGTTCTTGAAGTTGGTCTTTTAGTCAATTCATCTCAAGGGAACAATATCAAAGAGAATAATGAAAATGTAGATTACTCTGGTTCTGCTCTTAATAATGCTTTCACTGATATGGATAGTGACTCACCAGAACTTGACCAAAATTCTGTGTTGGATTCTAGAGTGGCGAATAATGCTTTGTCTATTAAAGAGTTTGATATGAATGATGCCCCTGTGGAGGTTCTTGAAGCTGGTCCTTTAGTGAATTCATCTGAAGAGAACAATGCCAAAGTGAATAATGAAAATGTAGATGACTCTGGTTCTGTTCTTAATCATGCTTTCACTGATATGAAAAGTGGCTCACCAGGACTTGACCAAAATCCAGTGTTGGATTCTTGTGTGGTGGACCATGTTTTGTCTTTTAAAGAGGTTGATATGAATGATGCCCATGTTGAGGTTCTTGAAGCTGGTTCTTTAGTGAATTCATCTCAAGGGAACAATACCAAAGAGAACAATAAAAATGTAGATGTCTCTGATTCTGTTCTTAATCACACTTTCACTGCTATGAATAGTGATTCTCCAGGGCTTGACCAAAATTCCGTGCTGGATTCTCAAGTGGCTGATAATGCTTTGTCTTTTAAAGAGCTTGATATGAATGATGCTCATGTCAGGGTTCTTGAAGCTGGTCCTTTTGTGAATTCAACTCAGGGGAACAATACCGAAGATAATGAAAATGTAGATGTCTCTGGCTCTGCTCTTAATAACGCTTACACTGATATGAATAGTGATTCTCCGGGGCTTGACCAAAATCCTGTGTTGGATTCTCAACTGGCGGATAATGCTTTGTCTTTTAAAGAGTTTGATATGAATGATGCCCGTGTCGAGGTTCTTGAAGCTGATCCTTTAGTGAGTTCAACTCAGGGGAACAATACTGAAGAGAATAATGATAATGTAGATGTCTCTGGCTCTATTCTTAATCATGCCGGTGAGAGTTCCTGGCATGTAAGATCTGATTTGAATGGTAAAATTGCACACGAGGTCGAAAAGAAATCACATTTGGACTCAAAAGTTGCTTCAAATGAAATGCACTTTGATGAAACTGGCCCAAATGCTTCTGATGGTACCAAGAAATTATGTTTTTCCAACCCTCACATTGTTATCGCCAGTCTGCCCAACCTCTTCAATTGGCCCCGATGTTCCTTTTTCAAGGGACGCAAATGTATCCACCAAAACTCAAAGGATGTAAAGACCTATCTTTGTGAAGGGTTTATTGGTGTTGATGAGGTTTTGATTCTGTTTCTTCAACTTTTTTGCTATGAAGTTTCTGGGTACCTCTCGTTTCACGGATCAGAGGCCTCTTCTTGA 4992 0.4165 MEPGTRIANPSGVVVKNRSSSGCLIVRKKGDGLGGDSSSSRKQYESKKVRKKVKEESSDSESSGELLMPPVRRPGPETIRVCNSLSALERGGNVGSSEISRKRERMEQIRRNGDDMVEGNGLERRDKKVKLEVFDFDEYDGAGVERMRRRQFDGDGVSLGGGRFMGTVHSGRGSIDREFESGSSRHIVDKRKSTYHDRASGSYLGDSVDHSRIKVKREGTQHPPSLLKEKFNSDESIRVQGKNGVLKVMVNKKKTGGSVEHYEHRKPVESRHSGRAEGTSKRNIPIQPSSRLETKSAEKQGVLVRPEKKQITRKSLSSKEDSKGDEQDSDNNDTSMNLEVKNIKAHTSSKKITSENEQTPVHDKLPTTKSSEGKIRRGSGTEKQKLREQIREMLLNKGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLIEDDQEAKAKGASSSFAPIADDVLNQLTRKTRKKMEKDLKMKKKKQRADDNDSGKERQIKRTAGKKHHMNGNDSDSNEDKLSSFIKQGGKSVKTKLPEISVTGGNSKSQNATTDKSFSESDPKLLHGRKSRKHGRCTLLVRSSNKGLNSESDDFVPYTGKRTVLSWLVDSGVVQVSQKVQYRRRKRVMLEGWITREGIHCGCCSKILTVSKFELHAGSKLPQPYQNIYLDSGVSLLQCQIDAWEKQENSGKISFHSVDVDGNDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTCKFCGLASGSIDKEDDATVYALQTCDLCEKKYHDCCTKDVSALHANSNMSGHSFCGKSCKELFEHLKKYLGTKHELDAGFTWCLVRRTDNDSEAASRGVTQRVECNSKLAVALTVMDECFLPVVDRRSGINLIHNSLYNSGSNFNRLNYTGFYTAILERGDEIISAASIRFHGTKLAEMPFIGTRHIYRHQGMCRRLFSAIEHALCSLKVEKLVIPAISELVHTWTTAFGFTHLEESLRQEMRSLNMLVFPGIDMLQKLLVEQGKLDDAEQFENGGVVSVNPTVVNRLGIDSLALQDPHESEDASSNPANKINTECSDASQDISSQGLTGRTVCSKSHSEERLSDSVSENCASPSNSSHGVLKKKKKISTSSPIDDMSPKCLLISPNGKSTNGLPSDPSDCHELPALCQATACSDLGTIKIEPVSDGKLHAITDMNCGLPGLARNPVLDSQVVDNALPSKEFDMNDAQVEVLEVGLLVNSSQGNNIKENNENVDYSGSALNNAFTDMDSDSPELDQNSVLDSRVANNALSIKEFDMNDAPVEVLEAGPLVNSSEENNAKVNNENVDDSGSVLNHAFTDMKSGSPGLDQNPVLDSCVVDHVLSFKEVDMNDAHVEVLEAGSLVNSSQGNNTKENNKNVDVSDSVLNHTFTAMNSDSPGLDQNSVLDSQVADNALSFKELDMNDAHVRVLEAGPFVNSTQGNNTEDNENVDVSGSALNNAYTDMNSDSPGLDQNPVLDSQLADNALSFKEFDMNDARVEVLEADPLVSSTQGNNTEENNDNVDVSGSILNHAGESSWHVRSDLNGKIAHEVEKKSHLDSKVASNEMHFDETGPNASDGTKKLCFSNPHIVIASLPNLFNWPRCSFFKGRKCIHQNSKDVKTYLCEGFIGVDEVLILFLQLFCYEVSGYLSFHGSEASS* 1664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4741 1663 Pfam PHD-finger 707 749 IPR019787 -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 480 497 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 471 569 - -
Psa6g4741 1663 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 1367 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 256 278 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 1 77 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 352 366 - -
Psa6g4741 1663 SMART PHD_3 706 747 IPR001965 -
Psa6g4741 1663 PANTHER PHD FINGER FAMILY PROTEIN 1 1367 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 41 61 - -
Psa6g4741 1663 SUPERFAMILY FYVE/PHD zinc finger 696 752 IPR011011 -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 1091 1116 - -
Psa6g4741 1663 Pfam Tify domain binding domain 629 679 IPR032308 -
Psa6g4741 1663 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 696 805 IPR013083 -
Psa6g4741 1663 CDD PHD2_CHD_II 707 746 - -
Psa6g4741 1663 ProSitePatterns Zinc finger PHD-type signature. 707 746 IPR019786 -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 536 556 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 367 385 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 90 121 - -
Psa6g4741 1663 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 894 984 IPR016181 -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 96 121 - -
Psa6g4741 1663 ProSiteProfiles Zinc finger PHD-type profile. 704 749 IPR019787 -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 256 385 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 298 330 - -
Psa6g4741 1663 MobiDBLite consensus disorder prediction 280 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4741 Psa-Chr6 415182073 415191165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4741 4 1008 PHD Transcription Factor Family AT4G14920 50.584 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Psa6g4741 TDBD 3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4741 - - mtr:MTR_1g103830 2402.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4741 6 415182073 415191165 Psa6g4741 6 415182073 415191165 ECH