Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4694 ATGGGAAAAAAAGGTAAATGGCTTAAGAATTTCTTGACAGGGAAAAGAGAGAAAGATAAAGAGAAAGAGAAATCTACAATAAACCAGAATTTTTCTAATGGACCAGAAAATCCAACTACTCCAATTTCTAGTTCAGGTTCTACAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCGTCCGCAACGGCCACACCGACGGTTTCTAAGGAGTTGAATAAATCTGAAGCTATTGCTTCAGTGACAGTACAAACTGTTACTGATATTCAGAATATTCAGAATATTCAGAATGAGCAGAGGAGTCATGCCATGGCTGTGGCTGTTGCTACTGCGGCGGCAGCTGATGCAGCAGTGGCTGCTGCACAGGCTGCAGCCGTTGTGATCCGCTTGACTTCTGGTTCGAATGAGAGTTGGAGAAGTATCGAAGAGGCTGCTGCTGTTAGAATTCAATGCGTCTTTCGATCTCACTTGGCGAGAAAGGCATTGCGTGCTCTGAGAGGATTAGTGAAGTTGCAGGCACTGATAAGGGGTCATTTGGTGAGAAAACAGGCTAAGGAAACACTTAGATGTATGCAGGCTTTGGTGACAGCACAGGCTAGAGCTCGGGCTCAACGGATCCGAATGGCGTCGGAAGGAAGGCCTAATCCAAATCAATCAACTCCTAGAAATGTCATGGAAAATGACTTGTTCAGGCAAATATATAATGAAATGGACAGAGGTTTGGAAGACAACATCAAGATTGTGGAAATGGACTTTTGTGAATCAAAAGGTAACTCTACAAGCAGAAGCAGCAGCGTAAATCATCAATATTCCACAAATGGTTCATATTCGTACTCAAAAGAAGAAAACTACAAAGTATCACCAACTCCATCAGCTGTAACAGAAATGAGTCCAAAAGCATGCAGTGGCCATTTCGAAGATTGCTTCAGTACAGCACAAAGCAGCCCTCATTACTATTCTGCTATATCGAAGAAAGACGATTCATCTTCAGACCATACTTTTTCATTCCCTAGTATGTCCTATGATTACCCTTTGTATCCAAGTTACATGGCTAATACAGAATCATCCAAGGCTAAAGCTAGATCACACAGTGCACCAAAACAAAGGCCGGATACATTTGAGAGGCAACTGAGCCGACGGAGAGTTTCGGTCGAGGGAAGAAATGTACCTAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGCCACTGCTCAGAATTACCAATATCCATGGTCAATTAAGCTTGATAGATCAGCGGTTTCGCTCCAAGACAGCGAGTGTGGCTCGACAAGTACAATGCTTACGAATACCAATTACTGCAGATCTCTTGTTGCATATGATCCAGATGGAGATAGGAACTAA 1365 0.43 MGKKGKWLKNFLTGKREKDKEKEKSTINQNFSNGPENPTTPISSSGSTKEKKRWSFRRSSATATPTVSKELNKSEAIASVTVQTVTDIQNIQNIQNEQRSHAMAVAVATAAAADAAVAAAQAAAVVIRLTSGSNESWRSIEEAAAVRIQCVFRSHLARKALRALRGLVKLQALIRGHLVRKQAKETLRCMQALVTAQARARAQRIRMASEGRPNPNQSTPRNVMENDLFRQIYNEMDRGLEDNIKIVEMDFCESKGNSTSRSSSVNHQYSTNGSYSYSKEENYKVSPTPSAVTEMSPKACSGHFEDCFSTAQSSPHYYSAISKKDDSSSDHTFSFPSMSYDYPLYPSYMANTESSKAKARSHSAPKQRPDTFERQLSRRRVSVEGRNVPRPVRMQRSSSHVGATAQNYQYPWSIKLDRSAVSLQDSECGSTSTMLTNTNYCRSLVAYDPDGDRN* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4694 454 MobiDBLite consensus disorder prediction 1 67 - -
Psa6g4694 454 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 431 - -
Psa6g4694 454 MobiDBLite consensus disorder prediction 353 374 - -
Psa6g4694 454 MobiDBLite consensus disorder prediction 359 374 - -
Psa6g4694 454 SMART iq_5 163 184 IPR000048 GO:0005515
Psa6g4694 454 SMART iq_5 140 162 IPR000048 GO:0005515
Psa6g4694 454 Pfam IQ calmodulin-binding motif 143 162 IPR000048 GO:0005515
Psa6g4694 454 Pfam IQ calmodulin-binding motif 168 184 IPR000048 GO:0005515
Psa6g4694 454 Gene3D - 141 192 - -
Psa6g4694 454 ProSiteProfiles IQ motif profile. 141 169 IPR000048 GO:0005515
Psa6g4694 454 MobiDBLite consensus disorder prediction 10 26 - -
Psa6g4694 454 Pfam Protein of unknown function (DUF4005) 323 386 IPR025064 -
Psa6g4694 454 ProSiteProfiles IQ motif profile. 165 192 IPR000048 GO:0005515
Psa6g4694 454 MobiDBLite consensus disorder prediction 27 49 - -
Psa6g4694 454 PANTHER IQ-DOMAIN 5-RELATED 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4694 Psa-Chr6 408149889 408152355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4694 1 444 IQD Protein Family AT4G14750 45.870 1.05e-102 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4694 - - gmx:100817667 564.688