Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4693 ATGGCGGGTAGATTACCTGGTGTTGGATTGTCACCAAGGAAAAAATCAGAACAACATCACAATAGACATGAAAATTATGCTATAAGAAAATCATTGGATTTGGATGCACCATGGACTTCAATGACTAATACCTTAGATGAAAATGCTTTCAAGGCTAAACAAAGACTTGAGAAGAAACTTGGTTACTTCTTTTCTTCTTCCAGGTCCAATGAAGAAAATCCAAAAAAAGGAGAAGAAAGTAAAAGCAGGTTTCAGAAGAAAGATGTAGGATTAGGTCGAAAATTACTAGAAAGTGCATGGTTATTACGTGGAAATAGGTTTAAGAAAGAGAGAAATGTTTGTGCTGTGTGCCTAGAAGATTTCCATCAAAATGAAGAGATTATGAACCTTTCTTGCTCACATAAGTATCATTCAGCATGTCTTCTCCCTTGGCTTGAAAGACATCCTCATTGTCCTTGTTGTAGAACCATGGTTCAGCCAAGGGATTAA 489 0.3661 MAGRLPGVGLSPRKKSEQHHNRHENYAIRKSLDLDAPWTSMTNTLDENAFKAKQRLEKKLGYFFSSSRSNEENPKKGEESKSRFQKKDVGLGRKLLESAWLLRGNRFKKERNVCAVCLEDFHQNEEIMNLSCSHKYHSACLLPWLERHPHCPCCRTMVQPRD* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4693 162 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 31 156 - -
Psa6g4693 162 MobiDBLite consensus disorder prediction 67 86 - -
Psa6g4693 162 ProSiteProfiles Zinc finger RING-type profile. 114 155 IPR001841 -
Psa6g4693 162 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 31 156 - -
Psa6g4693 162 SUPERFAMILY RING/U-box 113 160 - -
Psa6g4693 162 SMART ring_2 114 154 IPR001841 -
Psa6g4693 162 MobiDBLite consensus disorder prediction 13 28 - -
Psa6g4693 162 MobiDBLite consensus disorder prediction 71 86 - -
Psa6g4693 162 MobiDBLite consensus disorder prediction 1 28 - -
Psa6g4693 162 CDD RING-H2_PA-TM-RING 113 155 - -
Psa6g4693 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 161 IPR013083 -
Psa6g4693 162 Pfam Ring finger domain 113 155 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4693 107 158 C3H Transcription Factor Family AT1G49850 42.308 1.72e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4693 - - gmx:100527548 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4693 6 407938180 407939983 Psa6g4693 6 407938180 407939983 ECH