Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4670 ATGAACGCCGGAGCCACCGTCATCCGATCCATCCTCGATAAACCTCTTAACCAGCTCACCGAAGATGACATTTCGCAACTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCTCAGGCGATCCAACAGGTTATTTCTCTCAAAGCGCTTCTTGAACCTACCGACGATGATTCTCCTGCACCCGTTTCCTCCGCCATACACCGCCATCATCACCACCACCCTCAACCTCCTCAAGGGAATTTGAGTGAAGCTCCGGTGAAGAGTCCGAATCGCGAGATCGGTGTACGGGCCGTGGAAGATGTTCAGAAATCCATTTCACCTGCTGCAGAAAAACCTACCGAGACAAATGATGCCCCTGCCGGAGGGTGCGCACCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACAGTCAATCATGCAACTTGCTGCAAGTCCGTCCCCGTTTCCTCAAGACAATCCTTTAAATAAAAATGCAGCAGTTTGGGCTTCTTCTTGCAACATACCGATTGATAAGGATGTCCTCTTCCCCACTAACACAGCAATTCTTCAAGTTTCTCAAACAGATAAGATGGTGGAATATCCTCTGCAATACAGGGAGAAAGGGAGCACACCTCGAGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCGCTGCAGCGATATCTTGAAAAGCGAAAGGACAGGGGAAGACCGAAGGGAAAGAAACTGACTGGCATAACTTCATCTAACTTTGAGATGTATTTGAATCTTCCAGTGAAGGTCCACGCCTCAAATGGGAACTCAAGCCGTAGTAGCACTGACTCTCCACCGCAGACTAGACTGCCTCTAGTTTCCAGTGGCTCAGCTGACAACCAGCCAAAAGTTGCCCTTCCTATTGATCTGAATGATAAAGATGTTCAAGAATGCTAA 993 0.4834 MNAGATVIRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDSPAPVSSAIHRHHHHHPQPPQGNLSEAPVKSPNREIGVRAVEDVQKSISPAAEKPTETNDAPAGGCAPSGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAASPSPFPQDNPLNKNAAVWASSCNIPIDKDVLFPTNTAILQVSQTDKMVEYPLQYREKGSTPRDADVEGQASRKVSLQRYLEKRKDRGRPKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTDSPPQTRLPLVSSGSADNQPKVALPIDLNDKDVQEC* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4670 330 SMART tify_2 136 171 IPR010399 -
Psa6g4670 330 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 4 315 - -
Psa6g4670 330 MobiDBLite consensus disorder prediction 283 330 - -
Psa6g4670 330 Pfam Jas motif 239 256 IPR018467 -
Psa6g4670 330 MobiDBLite consensus disorder prediction 283 313 - -
Psa6g4670 330 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 315 IPR040390 -
Psa6g4670 330 MobiDBLite consensus disorder prediction 64 98 - -
Psa6g4670 330 MobiDBLite consensus disorder prediction 225 239 - -
Psa6g4670 330 Pfam tify domain 142 170 IPR010399 -
Psa6g4670 330 MobiDBLite consensus disorder prediction 225 244 - -
Psa6g4670 330 ProSiteProfiles Tify domain profile. 136 171 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4670 1 306 Tify Gene Family AT4G14720 43.323 3.96e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Psa6g4670 tify 6.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4670 - - gmx:100813937 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4670 6 406308265 406314249 Psa6g4670 6 406308265 406314249 ECH