Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4654 ATGTCCACGTCATCACCACCACCACCACCACATCCTCCTCCGCCTCAAACAAACAAGAAACCGACTTCCACCGTCATCACTGGTTGCTCTTTCTTCTTCGCGCTTCTTCACTGCCTCCGCAACGAAAAACGAACTACTCCATCCTCCGACTCAGACTCCAACTCTCCTCATCCCTTCTCCTACTCCCTCCTCCGCCGCGCAACAAACTCCTTTTCCAATATCCTCGGTCACGGAGGATTTGGTCCTGTGTACTCCGGAACGCTACCTTCCTCCGGTAAACTAATCGCCGTCAAGCTTATGAACTCTTCTACCTCCTCCCTCGGCTGCCAAGGCGAACGCGAATATCACAACGAACTCTTCTTCGCCGCCAGACTCCATTCCAACCTCCTCGTTCCCGCCATCGGTTTCTCCTCCGATCCAAAACACCGTCGTTTTCTTCTCGTCTATGATCTCATGAAAAACGGTAACCTCCACGACGCGCTCTTCCGTCGTAAATTCCCCGAGTTAACGCTATGGAAAACGCGGTTTTCCATAATCCTCGAAATCGCGAAAGGAATCCAATATCTTCATTCTTGCGATCCACCAATCATTCACGGTGACATCAAACCTAGTAACATTCTCCTTGATCATTCCTTTTCGGCTAAAATCGCCGATTTCGGTCTCGCCAGGTTGAAAACCCTATCCTCTTTCGAATTCAGAAGAGATGAATTCGAGAGTGATGAGACGGAAATTGAGAGTGTTAACACTAGCTTTGAGGAATATGAAACCGACATGAAGGAGAAGAGAAGACCAGCAAGGGAATGGTGGAAGGAAGAGTATTCTCAAGAGCTCACCAACAAGAACAAGAAGAAAACGGGTGGAAACAATGGCGATAATTGGTGGAAATGGGAGAGAGATCGCGATGATGTTGATGCGAAAAAACGCAGTAGTAAAAGCCGTAGCAGAAAGGATCGTGGTAGCGATGATTCATGGTTGAGTGGTGAGTTAAGGAGAGTTAGTTGGAATAGCTATGATTCATGTAATAGCGGAGAAATTCACAAGAGTGGTGAAATCAGCAGCACAACAAGTATGAGAGGAACTGTTTTTTACGTCGCGCCTGAAAATGGTTATAGCGGAGGTGGCGATGTAACAGAGAAATGTGATGTTTATAGTTTTGGTGTGTTATTGCTTGTTATTGTTTCTGGGAGGAGGCCTCTTCAGGTGAATGATGGTGTGCATGTTTCTGAGTTTAAGAGAGCGAATTTGGTGTCTTGGGCTAGACATTGTGGGCGGAATGGGAAACTGCTTGACCTTGTTGATCCTTGTGTTGAGTTGTTGTTAGTGGATGATAGAGAGCAGGCTCTATTGTGTATCAAAGTTGCATTGGTTTGTTTGATGAAATCGCCTAATCGTCGTCCTTTGATGAAAGAAGTTTTGGGAATGCTTAGTGGTGAATTGGAACCACCGCAATTGCCACATGAGTGCTCGCGGACCCGATTCCAATTCAAGAATCGGAAAGAAAGTTTGTGA 1509 0.4639 MSTSSPPPPPHPPPPQTNKKPTSTVITGCSFFFALLHCLRNEKRTTPSSDSDSNSPHPFSYSLLRRATNSFSNILGHGGFGPVYSGTLPSSGKLIAVKLMNSSTSSLGCQGEREYHNELFFAARLHSNLLVPAIGFSSDPKHRRFLLVYDLMKNGNLHDALFRRKFPELTLWKTRFSIILEIAKGIQYLHSCDPPIIHGDIKPSNILLDHSFSAKIADFGLARLKTLSSFEFRRDEFESDETEIESVNTSFEEYETDMKEKRRPAREWWKEEYSQELTNKNKKKTGGNNGDNWWKWERDRDDVDAKKRSSKSRSRKDRGSDDSWLSGELRRVSWNSYDSCNSGEIHKSGEISSTTSMRGTVFYVAPENGYSGGGDVTEKCDVYSFGVLLLVIVSGRRPLQVNDGVHVSEFKRANLVSWARHCGRNGKLLDLVDPCVELLLVDDREQALLCIKVALVCLMKSPNRRPLMKEVLGMLSGELEPPQLPHECSRTRFQFKNRKESL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4654 502 PANTHER OS07G0586332 PROTEIN 2 259 IPR044576 -
Psa6g4654 502 PANTHER OS07G0586332 PROTEIN 251 501 IPR044576 -
Psa6g4654 502 Pfam Protein kinase domain 73 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4654 502 SUPERFAMILY Protein kinase-like (PK-like) 53 488 IPR011009 -
Psa6g4654 502 Gene3D Transferase(Phosphotransferase) domain 1 330 486 - -
Psa6g4654 502 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 251 501 - -
Psa6g4654 502 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 2 259 - -
Psa6g4654 502 ProSiteProfiles Protein kinase domain profile. 69 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4654 502 Gene3D Transferase(Phosphotransferase) domain 1 60 249 - -
Psa6g4654 502 MobiDBLite consensus disorder prediction 1 21 - -
Psa6g4654 502 MobiDBLite consensus disorder prediction 1 19 - -
Psa6g4654 502 SMART serkin_6 69 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4654 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4654 Psa-Chr6 404586157 404588282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4654 354 475 Receptor kinase-like Gene Family AT3G58690 34.646 2.26e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Psa6g4654 Pkinase 1.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4654 - - aprc:113872924 512.301