Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4651 ATGAAAAAGATTGCTGGTTCAGCAGAGGGTGAATCTTCAAGTGGTCAATTTATATTGCAGTACATGTCTTGTCGTGAGAACACTTGTTTTACCAATTATGTAAATGAATATATTTTGGATAGTAGTGAAAGCACTAGGAGTGATGATCACGATAATGGTTGTGACCAGTACAATGATATAGTTAATGGTGGAAATGGATTTTCTTTATCTGATGAGTCTGAAACTGGAAAAGATCCGTCTAGGAATATGACTTGTAATCATTCTGGAAGGTTTTCTTGCTTGAGGACAATCGCTTCGCTTGCCCCGAACGCTCGTGTTGACAAGTGTTCCTTTTCTGTACTTCAAGAGGCTGCCAATGATTTCTTGTCCGGGTTAACTGAATGTCACGTGTTAGAATCACTGGGTCTTTTCATTGATGGGAAAGCATCTGGGCGGGACAGTATGAATTTCCTTAGTTTAATTGGGTTTCCATCATTTGAAGAACACACCTTTCCAGGCACTTTGAGGCATCCAAATATAGCTCCTGTACTCACAATTCTAAAAGCGTCTGACTATACTAACATAGTGCTTCCGAAGACTCCATACAACTTGGAAACTATTCTTCATTTTAACCCCAATGCAATAAAGTCTGATTGGAATAGAAGATTTCTTATGTATCAGCTACTCTCGGCCTTATTGTACATGCATGGTTTAGGGGTTTCCCATGGTAATATATGCCCGTCCAATATTATGTTGACGGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTGTATTGGAATCTAATTTAACTTTGCAAGAGAGTGAGAGTGTTAATTCAAAACCTGCAAAAGTTGGTTGTAGTAATGGTAGCTGTCACTCTAATGACCTTTATGCTGATCTAAAGCTTTCTGCACAAATTGATTGGCATTCCAGCTTTCATCAGTGGTGGAGAGGAGAGCTAAGTAATTTTGAGTATTTACTCATCTTAAACAGATTAGCTGGAAGAAGGTGGGGGGACCATACATTTCATCCCGTAATGCCTTGGGTTGTTGATTTTAGCTCAAAACCGGATGATAATTGTGATGCAGGGTGGCGAGACTTAAGCAAGAGCAAATGGCGCTTGGCTAAAGGTGATGAACAGTTGGATTTCACCTATTCAACGTCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCGGAATTGGCCGTGTGCAGCTATAAAGCAAGAAGGTTGCCTTTGAGTGTTCTTCGGATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCTTCAATGCAGAGGCTCTATCAATGGACGCCCGATGAATGCATTCCAGAGTTTTATTGTGATGGCCAAATTTTTAGGTCGATACATGATGGTATGACTGATTTGGCTATACCTTCTTGGGCAGAGAGCCCCGAGGATTTCATTAAATTGCATCGTGATGCATTGGAAAGTAATAGGGTGTCATTTCAACTCCATCACTGGATAGATATAATCTTTGGGTACAAAATGTCTGGCCAGGCTGCAATTGTTGCTAAGAATGTTATGCTTACTCAATCAGAATCCACTATACCGAGATCAACTGGACGTCGTCAGCTCTTTATGCGACCACATCCCATTCGTCACGCCACTGCCAGAATAACACGTAATGGGTCCAATAAATATGCCAAAGTTTTGACCCAAACAAATGAAATGCAGCGAGAGACATCTCTTCTATCCGAAACTGCTTATCTACAAGAACTGGAACAAGCATCTGCATTTTCAGAACATGCTAGGCATTTGAATGCTTGTTACCGTTACCCATTAAGTCAGATGAAAAGAAAGAACATCTCATCACTGGGAGATCCAACAGCAGGGACATTTAATAAAAATATAAGTGATGTATCTTTGATTGACAGAAATTACTGGGTGCCGTATAAAATGAATCATATATCCTTTCTTCAACATATGAAAGAGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGCTTCTCTGGAGGCAGAAGTTGTCGTCTTCAAGACTTGCCTCTGAAGATATTGCAAGGGACATATTTTCTGTCGGTTGTCTCTTGGCAGAACTTCATCTTTGCAGGCCGCTCTTTGATTCAATCTCATTGGAAATATACTTGGAGGATGGAACATTACCGGGATTTCTGCAGGAACTACCTCCTCATGTTAGAATACTCGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCAGCCAAAATTCTTCTGGAATCACCTTATTTTCCAAAAACAATCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTTGCTAGAGATGAATCTCGCCTTCGTTTTGCTGCGAATCTTGCAAAGCAGGGAGCTCTCAGGCAAGTGGGTGCATTCGCAACTGAAATGTGTGCTACTTATTGCCTACCACTTATACTGAATGCTGTGAGTGATACTGAAGCTGAATGGGCATATATATTACTGAAGGAATTGATAAAATGCCTAACAGCACAAGCAGTGAAAACATTAATACTACCAACCATACAGAAAATTTTACAGAACACAGGTTATTTACATTTAAAGGTTTCCCTTTTACAAGATTCATTTGTACGTGAAATATGGAACCGAGTTGGTAAACAAGCATATCTGGAAACTATTCACCCATTGGTCTTATCAAACTTGTATATTTCTCCGGATAAAAATTCAGCTGCATCTGCTTCGGTGCTTCTAATTGGCTCCAGTGAAGAGATTGGCGTACCAATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTGTGTGTAGATGGCATTGATGTGCTGGTCAGAATCGGGGGTATTTTTGGGGAAACGTTTATTATTAAACAGATGCTACCATTACTAAAAAATGTTGTTCGGTCCTTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGTATGATGACTATAGATGGCCTTGTAGCTTTCTTGTCAGAAGAAGTCATTGTAAAGGAGCTGCTTGAAGACATAAGTGGCATACACATTGGGGTTCTTATGCAGAAACATATGGAATTTGCTGTGCTTCAGGTTGCTGCTAGTACTCTCTTTGGAATTTGTCAGCGGATGGGAGCAGATTTGACGGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCGACTACTGTCGGCAGAAACTTCAAGGTTTCCAAATTAAAAATTGGAGGGGACTTCCAAATTGAGAGTCGTATGGATCTTGTGTTGCTTCTCTATACCTTGTTTGCGTCTCTTCTTGGGATTGAGAAGCTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAGTTACTTCTACGCCGTCATAACTGGAAGTGGGAATATGCAGGAGAATCATCAAGAAATGGCTCAGAAAATAACATTGCTAGAAGACCTGCAATTTGCCAGGGACTCGCATCTGAATACAATCCCGCAAAGTTGTTGCTTAATGGGGTTGGCTGGTCAATTCCACAATCCCAGGGTAGTAGAGGTGCCAAAAATTTGATTCAGAGAAGATCATTCAAAGTTCATCATAGCCCAGTAGTAATGCAAGAAGGAACGCCAAACCAAGTGAACCTTGAACCATGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTTCATTTCTTGGGCGGGTGGGGATCCAAAAAGATGATCTTCCTTGGAAGATCAGAGCATCTGTAATCCACTCTATACGTGCACATCATGGAGCAGTGAGGTCTATGGCGGTACATCAGGATGAATCTACCATTTTTACTGCTGGAATTGGCCAAGGATATAAAGGAACTGTTCTGAAGTGGGAATTGAGCCGAACGGACTGTCTGTCCGGCTATTATGGCCACGAGGAGGTTGTGAACGATATTTGCATTTTATCATCTAGTGGAAGAGTGGCATCTTGTGATGGCACAATTCATATTTGGAATAGTCAAACAGGAAAGCAAATATCTGTATTTGCCGAATCCGAAACTGAATCTGGCCATCCCACGAGCCATCCAACATCTGTACCAAAAGTTAGCAGTGACCAGGCAAATGTCCTTAATTTGAATACTCTATCAAATGGAATGTTGTCTAGCGCATTTGATTCAAGTCTTTATACTTGTATGCATCTGTTGGACTCTGCTGAAACTCTCGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGGGGGGAATCTAATGAACCTAGCTTTCATTCGCTTATTTCTGCCATTTGTTCCTCTGGTTCTAACAAGACTCAAGCAGGTGGAATTTCCAACTCACCATCTTTAATTGCAACTGGACTAAGCTCTGGTCACTGTAAATTATTTGATGCAAAGAGTGGAAATGTTATTTCTTCATGGCGTGCTCATGACGGATATGTGACGAAGTTGGCATCACCTGAAGAACATCTACTCATTTCCAGCTCTCTGGATAGAACTTTACGAGTCTGGGACTTAAGAATGAATTTACCGTCACAACCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGACGTTATTTCAATTTCCCGGAATAGGATTGGGCTTCTTTCCTTGTCTAAGTCTACCAATGAAATGGATGGGCAGCATCACATTATCCCCCAGAAACTCTATGTTTCTGATAATGGAATGAGAAGCTTATCGGCATTATCAAGTATCAGTATACTTCCTTTCTCTCGATTGTTTCTTATTGGAACAGAAGATGGTTTTTTGAGAATATGTTGTTAA 4860 0.4107 MKKIAGSAEGESSSGQFILQYMSCRENTCFTNYVNEYILDSSESTRSDDHDNGCDQYNDIVNGGNGFSLSDESETGKDPSRNMTCNHSGRFSCLRTIASLAPNARVDKCSFSVLQEAANDFLSGLTECHVLESLGLFIDGKASGRDSMNFLSLIGFPSFEEHTFPGTLRHPNIAPVLTILKASDYTNIVLPKTPYNLETILHFNPNAIKSDWNRRFLMYQLLSALLYMHGLGVSHGNICPSNIMLTDSLWSWLRLWNEPVLESNLTLQESESVNSKPAKVGCSNGSCHSNDLYADLKLSAQIDWHSSFHQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVVDFSSKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSSMQRLYQWTPDECIPEFYCDGQIFRSIHDGMTDLAIPSWAESPEDFIKLHRDALESNRVSFQLHHWIDIIFGYKMSGQAAIVAKNVMLTQSESTIPRSTGRRQLFMRPHPIRHATARITRNGSNKYAKVLTQTNEMQRETSLLSETAYLQELEQASAFSEHARHLNACYRYPLSQMKRKNISSLGDPTAGTFNKNISDVSLIDRNYWVPYKMNHISFLQHMKEEDEGSSGYPDLLLWRQKLSSSRLASEDIARDIFSVGCLLAELHLCRPLFDSISLEIYLEDGTLPGFLQELPPHVRILVEACIQKDWMRRPSAKILLESPYFPKTIKSSYLFLAPLQLVARDESRLRFAANLAKQGALRQVGAFATEMCATYCLPLILNAVSDTEAEWAYILLKELIKCLTAQAVKTLILPTIQKILQNTGYLHLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKNSAASASVLLIGSSEEIGVPITIHQTILPLVHCFGKGLCVDGIDVLVRIGGIFGETFIIKQMLPLLKNVVRSFIDVSCMNKPDPVQSWSALALIDCMMTIDGLVAFLSEEVIVKELLEDISGIHIGVLMQKHMEFAVLQVAASTLFGICQRMGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNFKVSKLKIGGDFQIESRMDLVLLLYTLFASLLGIEKLRQCCATWLLLEQLLLRRHNWKWEYAGESSRNGSENNIARRPAICQGLASEYNPAKLLLNGVGWSIPQSQGSRGAKNLIQRRSFKVHHSPVVMQEGTPNQVNLEPWFWFPSPATIWDGPSFLGRVGIQKDDLPWKIRASVIHSIRAHHGAVRSMAVHQDESTIFTAGIGQGYKGTVLKWELSRTDCLSGYYGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQISVFAESETESGHPTSHPTSVPKVSSDQANVLNLNTLSNGMLSSAFDSSLYTCMHLLDSAETLVVGTGNGSLRFIDVARGQKLHIWRGESNEPSFHSLISAICSSGSNKTQAGGISNSPSLIATGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLASPEEHLLISSSLDRTLRVWDLRMNLPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSTNEMDGQHHIIPQKLYVSDNGMRSLSALSSISILPFSRLFLIGTEDGFLRICC* 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4651 1619 Pfam WD domain, G-beta repeat 1304 1339 IPR001680 GO:0005515
Psa6g4651 1619 Pfam WD domain, G-beta repeat 1485 1521 IPR001680 GO:0005515
Psa6g4651 1619 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1490 1523 - -
Psa6g4651 1619 SUPERFAMILY BEACH domain 298 540 IPR036372 -
Psa6g4651 1619 CDD PKc 168 248 - -
Psa6g4651 1619 MobiDBLite consensus disorder prediction 1350 1370 - -
Psa6g4651 1619 Gene3D Transferase(Phosphotransferase) domain 1 160 297 - -
Psa6g4651 1619 SUPERFAMILY Protein kinase-like (PK-like) 678 774 IPR011009 -
Psa6g4651 1619 SMART WD40_4 1256 1299 IPR001680 GO:0005515
Psa6g4651 1619 SMART WD40_4 1584 1619 IPR001680 GO:0005515
Psa6g4651 1619 SMART WD40_4 1424 1480 IPR001680 GO:0005515
Psa6g4651 1619 SMART WD40_4 1302 1339 IPR001680 GO:0005515
Psa6g4651 1619 SMART WD40_4 1384 1421 IPR001680 GO:0005515
Psa6g4651 1619 SMART WD40_4 1483 1521 IPR001680 GO:0005515
Psa6g4651 1619 ProSitePatterns Trp-Asp (WD) repeats signature. 1508 1522 IPR019775 -
Psa6g4651 1619 Gene3D BEACH domain 300 561 IPR036372 -
Psa6g4651 1619 SUPERFAMILY WD40 repeat-like 1259 1617 IPR036322 GO:0005515
Psa6g4651 1619 CDD Beach 310 540 IPR000409 -
Psa6g4651 1619 Pfam Beige/BEACH domain 310 519 IPR000409 -
Psa6g4651 1619 SMART Beach_2 308 540 IPR000409 -
Psa6g4651 1619 ProSiteProfiles Trp-Asp (WD) repeats profile. 1490 1523 IPR001680 GO:0005515
Psa6g4651 1619 SUPERFAMILY Protein kinase-like (PK-like) 165 250 IPR011009 -
Psa6g4651 1619 Gene3D Transferase(Phosphotransferase) domain 1 664 760 - -
Psa6g4651 1619 ProSiteProfiles BEACH domain profile. 296 566 IPR000409 -
Psa6g4651 1619 PANTHER GH12955P 9 1619 - -
Psa6g4651 1619 Gene3D - 1252 1460 IPR015943 GO:0005515
Psa6g4651 1619 Gene3D - 1461 1619 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4651 Psa-Chr6 404295038 404307651 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa6g4651 Beach 2.4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4651 K17601 - gmx:100810047 2728.74