Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4647 ATGGAACCAGAGATGCAAGAGAATGGCTCTACAGCTGAGGGTGTTGATTCTAGCCATAGTTCCAAGGGAACAACAACAAGAGCAGCTGGAGAATGTGGTGCGAAGCCATTACCAGCATTGAAAGATAATGTCAAGAGAGTTACTATTACTCCTGAGGTGTCATCAAGAACAGTAAACAGATCCATTATAGCTGAGCTTGTGAGATTGTATAAAGACTCTGACTTAGGGATGAGGCTTCCTGCTTCTGATGGCAGAAAAAGTGCACACGATCCGTATCCATTGTTCCTCCAGCATACTATGGAACCAGAGATGCAAGAGAATGGCTCAACAGCTGATGGTGGCAATCCTAGCCATAGTTCCAAGGGAACAACAAGAACAGCTGGAGAATGTGGTGTGAAGCCATTAAGAGAGTGCTAG 417 0.4508 MEPEMQENGSTAEGVDSSHSSKGTTTRAAGECGAKPLPALKDNVKRVTITPEVSSRTVNRSIIAELVRLYKDSDLGMRLPASDGRKSAHDPYPLFLQHTMEPEMQENGSTADGGNPSHSSKGTTRTAGECGVKPLREC* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4647 138 MobiDBLite consensus disorder prediction 103 138 - -
Psa6g4647 138 PANTHER PROTEIN ARGONAUTE 10 41 89 - -
Psa6g4647 138 MobiDBLite consensus disorder prediction 103 126 - -
Psa6g4647 138 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 41 89 - -
Psa6g4647 138 MobiDBLite consensus disorder prediction 10 27 - -
Psa6g4647 138 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4647 Psa-Chr6 404222345 404225311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4647 37 89 Eukaryotic Initiation Factors Gene Family AT5G43810 71.698 1.26e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4647 K11593 - gmx:100807513 78.5666