Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4645 ATGGAACCAAAGATGCAAGAGAATGGCTCTACAGCGGATGCTGGTAATTCTAGCCATAGTTCCAAGGGAACAACAAGAGCAGCTGGAGAAAGTGTGTGTGCTCAAGCTCACAGACAGGAACTTATACAAGATTTATACAAAACATGGCATGATCCTGTTCGCGGCACTGTTAGTGGCGGCATGATAAGGGATGGTGTAAGTGAAGGACAGTTTTACCAAGTTTTACTCTATGAGTTGGATGCAATCCGGAAGGCATGTGCTTCCTTAGAACCAAACTATCAGCCTCCATCGAAAACTTTAACTGTCTGCAAAATTCTTTTTCGTGCAGTTCCTCCGGCAGACTATGCACATTTAGCCGCCTTTAGAGCACGATTCTATATGGATCCCGAGACGCAAGAGAATGGCTCTACAGCTGATGGTAATTCTAGTCATGGTTCCAAGGGAACAACAAGAGCAGCTGGAGAATGTGGTGTGAAGCCATCAGCAGCTCTGAAAGATAATGTTAAGAGAGTGATGTTTTACTGTTAG 528 0.4451 MEPKMQENGSTADAGNSSHSSKGTTRAAGESVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPSKTLTVCKILFRAVPPADYAHLAAFRARFYMDPETQENGSTADGNSSHGSKGTTRAAGECGVKPSAALKDNVKRVMFYC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4645 175 MobiDBLite consensus disorder prediction 1 30 - -
Psa6g4645 175 PANTHER ARGONAUTE1 21 64 - -
Psa6g4645 175 PANTHER ARGONAUTE1 63 102 - -
Psa6g4645 175 PANTHER ARGONAUTE1 108 174 - -
Psa6g4645 175 MobiDBLite consensus disorder prediction 132 149 - -
Psa6g4645 175 MobiDBLite consensus disorder prediction 9 28 - -
Psa6g4645 175 ProSiteProfiles Piwi domain profile. 63 105 IPR003165 GO:0003676
Psa6g4645 175 MobiDBLite consensus disorder prediction 132 153 - -
Psa6g4645 175 Pfam Piwi domain 31 102 IPR003165 GO:0003676
Psa6g4645 175 Gene3D - 102 175 IPR036397 GO:0003676
Psa6g4645 175 Gene3D - 3 101 IPR036397 GO:0003676
Psa6g4645 175 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 63 102 - -
Psa6g4645 175 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 21 64 - -
Psa6g4645 175 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 108 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4645 Psa-Chr6 404217338 404218760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4645 65 175 Eukaryotic Initiation Factors Gene Family AT5G43810 46.429 1.78e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4645 K11593 - mtr:MTR_3g101730 131.724