Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4641 ATGGCTGCTAAGTTAAGCACAGAAGAAGCGAAAAAGCTAGAATCTGAAGATGGTGTTGTAGCTATATTCCCTGATACAAAGTATGAACTTCACACAACAAGAAGTCCTTATTTTCTTGGTCTTGAACCGATTCAAACCAACAACAGAAGCTGGTCGGGAAAACTAGTTAGCCATGATGTTGTAGTTGGAGTTTTGGACACTGGTATTTGGCCTGAGAGTGAGAGTTTCAATGATGCCGGAATGACGCCGGTACCTTCTCATTGGAAAGGTGCATGTGAAACTGGTAGAGGGTTCCAAAAACATCATTGTAACAAGAAGATTGTAGGTGCGAGAATCTTCTACCATGGATATGAAGCAGCAACTGGTAAGATTGATGAGCAAGCAGATTACAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCTACTGTTGCTGGATCTCCAGTTCATGGTGCTAATCTTCTTGGTTACGCTTATGGAACCGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTACAAAGTGTGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCGGTTGATACAGCAGTAGCCGACGGAGTCAATGTTTTATCGATCTCTTTAGGTGGTGGAGTTTCGTCTTACTACCGCGATAGTCTATCCGTAGCTTCATTCGGAGCTATGGAAAAGGGTGTTTTTATTTCATGTTCAGCAGGAAACTCAGGACCTGAGCCTGTGAGCTTAACAAATGTTTCACCATGGATCACAACAGTTGGAGCTAGCACAATGGACAGAGATTTTCCTGCAGATGTTAGCCTCGGAAACGGAAGGAAAGTAACCGGAACATCGCTCTATAAAGGGCGAGCTATGCTCTCGGTTCGAAAACAATACCCTCTGGTATACTTGGGAGGTAACTCAACTAGTCCTGATCCAAGATCTTTGTGTTTAGAAGGTACTCTAGATCGTAAAATCGTCGCGGGAAAGATCGTGATTTGCGATAGAGGAATTAGTCCTAGAGTTCAAAAGGGTCAAGTAGTGAAAAATGCAGGAGGTGTAGGAATGATTCTCACAAACACAGAAGCAAATGGTGAAGAGCTTGTAGCAGATTGTCACCTAATTCCAGCAATAGCACCACTTCGAGACGCTTCTTCCGCCGAGTTTTCAACTCCTTACGATCATGGTGCCGGTCACATTAACCCGAGAAAAGCTCTTGAACCAGGTTTAGTATACGATATCCAACCGCAAGACTACTTCGAGTTTCTTTGCAAACAGAAACTGAGTGCTTCAGAATTAGCAATTTTTTCTAAACATTCAAACAAAACATGCAAACACACTCTTGCTAATGTTGGTGACTTGAACTATCCTGCTATATCAGTAGTGTTTCCTGAGAAAACAACCGGTTCGGCTTCGACGATTCACCGAACTGTCACCAATGTTGGACCTGCTGTTTCGAAATATCGTGTGATTGTTACACCATTCAAAGGTACTGAAGTTAAAGTTGAGCCTGATACATTGAAGTTTACAAGAAAGTATCAGAAATTATCTTATAAGATTAGTTTCAAAGTTACAACAAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATGGGGTGCATAAAGTAAGAAGTCCTATTGTGATTACATATCTTCCACCAATGTGA 1671 0.4231 MAAKLSTEEAKKLESEDGVVAIFPDTKYELHTTRSPYFLGLEPIQTNNRSWSGKLVSHDVVVGVLDTGIWPESESFNDAGMTPVPSHWKGACETGRGFQKHHCNKKIVGARIFYHGYEAATGKIDEQADYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDTAVADGVNVLSISLGGGVSSYYRDSLSVASFGAMEKGVFISCSAGNSGPEPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKVTGTSLYKGRAMLSVRKQYPLVYLGGNSTSPDPRSLCLEGTLDRKIVAGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTEANGEELVADCHLIPAIAPLRDASSAEFSTPYDHGAGHINPRKALEPGLVYDIQPQDYFEFLCKQKLSASELAIFSKHSNKTCKHTLANVGDLNYPAISVVFPEKTTGSASTIHRTVTNVGPAVSKYRVIVTPFKGTEVKVEPDTLKFTRKYQKLSYKISFKVTTRQSEPEFGGLVWKDGVHKVRSPIVITYLPPM* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4641 556 Gene3D Peptidase S8/S53 domain 59 264 IPR036852 GO:0004252|GO:0006508
Psa6g4641 556 CDD PA_subtilisin_like 271 378 - -
Psa6g4641 556 Pfam Fibronectin type-III domain 452 550 IPR041469 -
Psa6g4641 556 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Psa6g4641 556 PRINTS Subtilisin serine protease family (S8) signature 135 148 IPR015500 -
Psa6g4641 556 ProSiteProfiles Serine proteases, subtilase domain profile. 38 556 - -
Psa6g4641 556 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 380 552 - -
Psa6g4641 556 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 1 378 - -
Psa6g4641 556 Gene3D - 265 378 - -
Psa6g4641 556 Pfam PA domain 297 377 IPR003137 -
Psa6g4641 556 CDD Peptidases_S8_3 28 264 IPR034197 -
Psa6g4641 556 Pfam Subtilase family 58 451 IPR000209 GO:0006508|GO:0008236
Psa6g4641 556 SUPERFAMILY Subtilisin-like 30 292 IPR036852 GO:0004252|GO:0006508
Psa6g4641 556 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 378 IPR045051 -
Psa6g4641 556 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 380 552 IPR045051 -
Psa6g4641 556 Gene3D - 422 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4641 Psa-Chr6 403820213 403822424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4641 379 556 Subtilisin-like Serine Gene Family AT5G51750 64.804 2.95e-75 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4641 - - gmx:100804847 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4641 6 403820213 403822424 Psa6g4641 6 403820213 403822424 ECH