Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4634 ATGTCCTTGAAATGTTTATGTTGTTTTCTCTCTAATGAAGAGCAAAGTCCAAGACGGAATGTTGACGACAAGAAAAATAGTAGGGATTATCCATGGGAAAGATACACTTTGAAGGAGTTGCTTCGTGCAACAAATAACTTTCATCAAGATAACAAAATTGGAGAAGGTGGATTTGGAAGTGTTTATTGGGGTCAAACAAATAAAGGCGTTGAGATTGCTGTGAAGAGGTTGAAGACAATGACTGCGAAAGCGGAGATGGAATTTGCAGTTGAAGTGGAAGTACTTGGAAGGGTGAGGCATAGGAATTTGTTGGGATTGAGAGGATTCTATGCAGGAGGAGATGAAAGGTTAATTGTGTATGATTACATGCCTAATCATAGTTTACTCACTCATTTACATGGTCAACTTGCCTCTGATTGTTTACTAGATTGGCCTAGAAGAATGAACATAACTATTGGTGCAGCTGAAGGTTTAGCGTATTTGCACCATGAGGCAAATCCTCACATA 507 0.3905 MSLKCLCCFLSNEEQSPRRNVDDKKNSRDYPWERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTNKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGQLASDCLLDWPRRMNITIGAAEGLAYLHHEANPHI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4634 169 Pfam Protein tyrosine and serine/threonine kinase 48 165 IPR001245 GO:0004672|GO:0006468
Psa6g4634 169 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Psa6g4634 169 Gene3D Phosphorylase Kinase; domain 1 9 122 - -
Psa6g4634 169 Gene3D Transferase(Phosphotransferase) domain 1 123 169 - -
Psa6g4634 169 ProSiteProfiles Protein kinase domain profile. 47 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4634 169 PANTHER OS01G0750732 PROTEIN 2 169 - -
Psa6g4634 169 PANTHER - 2 169 - -
Psa6g4634 169 SUPERFAMILY Protein kinase-like (PK-like) 30 165 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4634 Psa-Chr6 403212543 403213551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4634 33 169 Receptor kinase-like Gene Family AT1G60800 47.826 7.49e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Psa6g4634 PK_Tyr_Ser-Thr 6.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4634 - - gmx:100815397 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4634 6 403212543 403213551 Psa6g4634 6 403212543 403213551 ECH