Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4619 ATGGAAGCTACGAGGCGTTGGTTTGGTAAGTTCAGGTCGAAAAATAAGGAAGCTACAAGCAAGGCGAAAGAAGGGTCAAAACCACCGATTAATGAAGATCCGCCTTCGAATGCAACCCAACAGAGGGTTGAAGCTGCAAAGCATTACATAGAAAATCATTATAAGAAGCAGATGCAGAGCCTGCAGGAGAGGAAGGAAAGACGTAATATGCTAGAAAAGAAATTGGCTGATGCTGAAGTTACCGAGGAAGAGCAGAACAATTTGCTTAAGTATTTGGAAAAAAAGGAGACAGAGATCATGCGCCTTCAGAGACATAAGATGGGTGCTGATGACTTTGAGCCCATGACTATGATTGGGAAGGGTGCGTTTGGAGAGGTTAGAGTCTGCCGGGAGAAGGCAACTGGGCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGACAGGTTGAACATGTCAAAGCAGAGAGGAACCTTCTTGCAGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGACGACGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATGATGACGTTGCTAATGCGGAAAGATATACTGACTGAAGATGAAGCTAGGTTCTATATCGGGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAACTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTGGATAGAAGCGGTCACATGAAATTGTCAGATTTTGGATTATGTAAGCCGCTTGACTGCACTAACCTTCAAGAAAAAGACTTATCTGTTGGAATTAGCAGAAGTGGAGCACTTCAAAGTGACGGACGTCCTTCGGCTCCTAAACGATCACAACAGGAGCAACTACAGCATTGGCAGAAAAATCGCAGAATGCTGGCCTATTCTACGGTTGGAACGCCTGATTATATTGCTCCAGAAGTTCTGCTGAAGAGAGGATATGGTGTTGAATGTGATTGGTGGTCTCTAGGAGCCATAATGTATGAAATGCTTGTGGGGTATCCGCCATTTTATTCGGATGAACCAATGGCAACTTGTAGAAAGATTGTAAATTGGAGAACAACTTTAAAATTTCCAGAAGAAGCTAAACTATCACCAGATGCAAAGGATCTTATTTGCAGACTCCTATGTAATGTGGAGCAGAGGCTGGGAATCAAAGGAGCTGATGAAATAAAGGCTCACGCATGGTTCAAAGGTGTTGAATGGGATAAGTTGTACCAAATGGAAGCTGCTTTTATGCCTGAGGTCAATGACGAACTCGATACTCAAAATTTTGAGAAATTTGAAGAGGCGGACAAGCAAACTGAACCTTCCTCAAAGGCCGGGCCGTGGAGAAAGATGCTTCCATCTAAAGATATTAACTTTGTTGGTTACACATACAAGAATTTAGAAATTGTGGGTGAAAGTGTAATACCTGGAATTGCTGAATTGAAGAAGAAGACGAAACCGAAAAGGCCATCTATTAAGTCCTTATTTGAGGATGAATCGGCTAAGGTTTGTTCTAATCAATCTGTTAGAGGGAGCTTCTTAAATCTGCTACCTCCTCAGATGGAAGTTCCAGAGAAAAATGAATGA 1617 0.4168 MEATRRWFGKFRSKNKEATSKAKEGSKPPINEDPPSNATQQRVEAAKHYIENHYKKQMQSLQERKERRNMLEKKLADAEVTEEEQNNLLKYLEKKETEIMRLQRHKMGADDFEPMTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYIGETVLAIESIHKHNYIHRDIKPDNLLLDRSGHMKLSDFGLCKPLDCTNLQEKDLSVGISRSGALQSDGRPSAPKRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKRGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWRTTLKFPEEAKLSPDAKDLICRLLCNVEQRLGIKGADEIKAHAWFKGVEWDKLYQMEAAFMPEVNDELDTQNFEKFEEADKQTEPSSKAGPWRKMLPSKDINFVGYTYKNLEIVGESVIPGIAELKKKTKPKRPSIKSLFEDESAKVCSNQSVRGSFLNLLPPQMEVPEKNE* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4619 538 MobiDBLite consensus disorder prediction 1 42 - -
Psa6g4619 538 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Psa6g4619 538 SMART serkin_6 112 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4619 538 SUPERFAMILY Protein kinase-like (PK-like) 87 458 IPR011009 -
Psa6g4619 538 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa6g4619 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Psa6g4619 538 Coils Coil 54 95 - -
Psa6g4619 538 MobiDBLite consensus disorder prediction 276 295 - -
Psa6g4619 538 SMART pkinase_C_6 412 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa6g4619 538 Gene3D Transferase(Phosphotransferase) domain 1 198 428 - -
Psa6g4619 538 ProSiteProfiles Protein kinase domain profile. 112 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4619 538 Pfam Protein kinase domain 114 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4619 538 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 34 512 - -
Psa6g4619 538 Gene3D Phosphorylase Kinase; domain 1 101 197 - -
Psa6g4619 538 CDD STKc_NDR_like 110 475 - -
Psa6g4619 538 MobiDBLite consensus disorder prediction 1 28 - -
Psa6g4619 538 Pfam Protein kinase C terminal domain 430 474 IPR017892 GO:0004674|GO:0005524|GO:0006468
Psa6g4619 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 34 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4619 Psa-Chr6 402255981 402261662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4619 17 534 AGC Kinase Gene Family AT4G14350 81.696 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa6g4619 Pkinase 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4619 K08790 - gmx:100795087 988.023