Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4617 ATGCTCACAATCACCACACAAATCTTCACTCCACCGCCACCATTGATACTCATTGAGGATTCTGATTCCATGGCCTCTAAAATGGAAAGCGATAGTCCAACAGATACCCCACCATCACCGCCAAAGACTATATACAAGGATCCAGATGATGGGAGGCAACGGTTTTTGCTTGAACTGGAATTTGTTCAATGCCTTGCTAATCCTACCTACATCCACTATTTGGCTCAGAACCGAAATTTTGAGGATGAAGCATTCATTGGGTACTTAAAATATCTCCAATATTGGAATCGCCCCGAATATATCAAATTTATCATGTATCCTCACTGCCTCTATTTTCTCGAGCTTCTTCAAAATGCAAATTTTCGCAATGCAATGGCACATCCTAGCAATAAGGAATTGACGCATAGACAGCAGTTCTATTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAAACCACTTCCAGAACCTAATGCTGCACTTCCTGCCTCAACTCAACCCCAGCCACCCGTGCCTGCACTACCACCAGTACCTGCTACGAATGTTGCTGTGACAGCATCTTCTACTCAAGCTCCTTCTCCAATGCCATATGGTGTCCCTCCTGGCTCTAGTCTTGCAAAAAATGACATGAGGAATCCTACTGTTGATAAAAGAAAAAGAAAGTAA 678 0.4263 MLTITTQIFTPPPPLILIEDSDSMASKMESDSPTDTPPSPPKTIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRNFEDEAFIGYLKYLQYWNRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELTHRQQFYFWKNYRNNRLKHILPKPLPEPNAALPASTQPQPPVPALPPVPATNVAVTASSTQAPSPMPYGVPPGSSLAKNDMRNPTVDKRKRK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4617 225 MobiDBLite consensus disorder prediction 186 225 - -
Psa6g4617 225 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 24 225 - -
Psa6g4617 225 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 41 142 IPR038089 -
Psa6g4617 225 MobiDBLite consensus disorder prediction 24 43 - -
Psa6g4617 225 Pfam SOH1 53 145 IPR008831 GO:0003712|GO:0006355|GO:0016592
Psa6g4617 225 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 24 225 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Psa6g4617 Med31 1.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4617 K15153 - gmx:100527879 333.954