Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4610 ATGTCTGAGAATGGTGACTTGGAAGAACATGAATCACAGGGCTTATACGAGGAGCTTTTGATGCTAAGAGTTAAGCATGAATCTCTTGCCCAGACTCAAAGGAATTTTTTGGGAGAAGAACTCAATACACTAAGCATAAAAGATTTGCAGAATATTGAAAAACAACTAGAGAGAACGCTTGCACAAGCTCGAAAGCACCAAATGCAGAAACTGATGACACGAGTTGATGAATTACGCAGAGAGGTTCACAAGGTGGAGGAGGTTAACAAACAGTTAGAATCCAAGGAAAAAGGTTTAAGCACCAATATTTGTGATGATTCTACTGATTTAACCATCTCCAACAACAACAATATCGTTACCAATTTGCATGATGCACAAGTCAGTGAGTTTGAATATGGTCAGTTTCGGCACCAACAAGCTGGTTCAAAAGGACGGGCAACATATACAAGGATTGACCGAGGCCAGAGTAGTCGCAACAAGAACAATGGATGGATGAATATTTGA 504 0.4008 MSENGDLEEHESQGLYEELLMLRVKHESLAQTQRNFLGEELNTLSIKDLQNIEKQLERTLAQARKHQMQKLMTRVDELRREVHKVEEVNKQLESKEKGLSTNICDDSTDLTISNNNNIVTNLHDAQVSEFEYGQFRHQQAGSKGRATYTRIDRGQSSRNKNNGWMNI* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4610 167 Coils Coil 46 95 - -
Psa6g4610 167 ProSiteProfiles K-box domain profile. 12 102 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa6g4610 167 Pfam K-box region 8 95 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa6g4610 167 PANTHER MADS-BOX TRANSCRIPTION FACTOR 13 152 - -
Psa6g4610 167 MobiDBLite consensus disorder prediction 136 167 - -
Psa6g4610 167 PANTHER MADS BOX PROTEIN 13 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4610 Psa-Chr6 401767336 401769668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4610 11 93 MADS-box Gene Family AT3G61120 42.169 5.71e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4610 K09264 - gmx:100793681 161.77