Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4608 ATGTCTGGAGGTCCATATTGGAATGTACTAAAAGGACGGAAAGATGGAAGGGTATCAAAGGCATCTGATACTGCCAACTTACCGGCTCCGACCTTTACTGTAGACCAACTCATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGATATGGTGACATTATCTGGAGGACACACTCTGGGCTTCTCACATTGTTCTTCCTTTGAGGCTCGCCTTCATAATTTCAGTTCAATGCATTACATTGATCCTAGGTTGAACACTGAATTTGCATTAGACCTAAGAAAGAAATGTCCAAAACCAAACAACAATCAAAACGCAGGGCAATTCCTAGACTCTACAGCATCAGTGTTTGATAATGACTATTACAAACAACTTCTGGCTGGAAAAGGTGTGTTTTCTTCCGATCAGTCACTTGTTGATGATTACAGAACTAGATGGATTGTAGAAGCATTTGCAAGAGACCAGAGTTTGTTTTTCAAAGAATTCGCAGCTTCAATGTTGAAAGTCGGAAATCTAAGAGGCTTTGATAATGGAGAGGTGAGACTAAATTGCAGGATTGTGAATTGA 567 0.4039 MSGGPYWNVLKGRKDGRVSKASDTANLPAPTFTVDQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFEARLHNFSSMHYIDPRLNTEFALDLRKKCPKPNNNQNAGQFLDSTASVFDNDYYKQLLAGKGVFSSDQSLVDDYRTRWIVEAFARDQSLFFKEFAASMLKVGNLRGFDNGEVRLNCRIVN* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4608 188 ProSiteProfiles Plant heme peroxidase family profile. 1 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PANTHER PEROXIDASE 25-RELATED 1 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 Gene3D - 1 188 - -
Psa6g4608 188 SUPERFAMILY Heme-dependent peroxidases 2 188 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 ProSitePatterns Peroxidases proximal heme-ligand signature. 50 60 IPR019793 -
Psa6g4608 188 Gene3D Peroxidase, domain 2 28 172 - -
Psa6g4608 188 PANTHER PEROXIDASE 66 1 187 - -
Psa6g4608 188 PRINTS Haem peroxidase superfamily signature 3 15 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PRINTS Haem peroxidase superfamily signature 50 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PRINTS Haem peroxidase superfamily signature 110 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 Pfam Peroxidase 2 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PRINTS Plant peroxidase signature 3 18 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PRINTS Plant peroxidase signature 49 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PRINTS Plant peroxidase signature 108 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PRINTS Plant peroxidase signature 124 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4608 188 PRINTS Plant peroxidase signature 164 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4608 Psa-Chr6 401511768 401512407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4608 1 188 Peroxidase AT5G51890 67.725 5.70e-93 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4608 K00430 - gmx:100799516 335.495