Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4602 ATGGCTGTTGCCGAGAGCGGCTGCAGCAGCAGCGAAGGCTCAACTTCATTCAATTGTTACAAAGTAGCAAACTTGACCGAAACCATATTGAACGCAACGCAAACTTCTAATTTGAAGGACCGATACATTCTTGGGGAGCAGTTGGGCTGGGGACAATTTGGTGTCATTAGAACATGCTCCGACAAAACGACTGGAGAGGTTTTGGCATGCAAATCAATTGCTAAAGATAGGTTGGTGACTTCGGATGATATGCAAAGTGTTAAACTTGAGATCGAGATCATGGCAAAGTTGTCTGGGCACCCGAATGTTGTAGATCTTAAGGCGGTTTACGAAGAGGAAGATTTCGTTCATTTGGTGATGGAGCTTTGCGCTGGAGGTGAGCTGTTTCACCTGTTAGAGAAGCACGGGAGGTTTTCTGAATCTGAAGGCATGGTTCTCTTTAGACATCTCATGCAGATGGTTTTGTACTGTCACGAAAACGGCGTCGTTCACCGAGATTTGAAGCCCGAAAACATTCTCTTAGCAACTAAATCCTTCTCGTCTCCAATTAAATTGGCCGACTTTGGCCTTGCGACCTACATTAAGCCTGGACAGAGTTTGCATGGTTTAGTCGGAAGTCCATTTTATATAGCTCCAGAAGTATTGGCAGGTGCATATAACCAGGCTGCGGATATTTGGAGTGCTGGGGTTATTCTTTACATCCTGTTGAGTGGGATGCCGCCGTTTTGGGGGAAGACAAAGTCGCGAATATTCGAAGCTGTCAAAGCTGCTGATTTGAGGTTCCCATCTGAACCTTGGAATCGGATCTCGGTATCTGCTAAGGATTTAATTAGACGAATGCTTTGCATAGAACCTTCTCAAAGGCTCACTGCTCAAGAGGTTTTGGATCATTGCTGGATGGAAAGCGATCCAACAAATCTGGAACAACTAAGTGAAAATAGAGTCGAAAGTTGTGGAGAGTGGCACGACGGCGGCTCATTCTCTGCATCATTTATGTCCAGAACTAATGACATCAGTTTTGGCGGTGGTTCACCTGCATGTGACGCTCAATCACCTACGTTCACATGCAAATCGTCGTTTTCTTCCATTTTCGTGGAACCGGTTACACCTTTTTCTGCCTCTGGCGGGTTTTCATTTCGAAGCTCGGGAGGTCCCATCGGTTTGGAATTTTCTACACCTGTTTCCTCTATGCCTAGCTTTGCATTTCTCAGCCACAGTTCTGTTGTCGAGCAAAAGAATCTTATATTCGAGTTCGATTCTAACACATCAGAAGTAAATGCAATCGCCAAAGATTCTCCTCTTAGCCTTGGAAATGATGTTAAAGAAAAGGATCACAAGCCTGTAGAGACGAAAAGGGCATGCGGAACAAATTGTAACCGGACATTGGGATTCCACAGCAAGAGAAACCGGACAATTGGACTTGGCGAGTGTGAGCAACTTGATCTTGTGGTGACCGAATCCGTCATTCGATGGTTATCATGCACACAACTTCCTACATCACCAAAATCATCTCTTGTCTGTTGA 1524 0.4508 MAVAESGCSSSEGSTSFNCYKVANLTETILNATQTSNLKDRYILGEQLGWGQFGVIRTCSDKTTGEVLACKSIAKDRLVTSDDMQSVKLEIEIMAKLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKHGRFSESEGMVLFRHLMQMVLYCHENGVVHRDLKPENILLATKSFSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADIWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEPWNRISVSAKDLIRRMLCIEPSQRLTAQEVLDHCWMESDPTNLEQLSENRVESCGEWHDGGSFSASFMSRTNDISFGGGSPACDAQSPTFTCKSSFSSIFVEPVTPFSASGGFSFRSSGGPIGLEFSTPVSSMPSFAFLSHSSVVEQKNLIFEFDSNTSEVNAIAKDSPLSLGNDVKEKDHKPVETKRACGTNCNRTLGFHSKRNRTIGLGECEQLDLVVTESVIRWLSCTQLPTSPKSSLVC* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4602 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 10 503 - -
Psa6g4602 507 Gene3D Transferase(Phosphotransferase) domain 1 129 324 - -
Psa6g4602 507 CDD STKc_CAMK 41 299 - -
Psa6g4602 507 SMART serkin_6 42 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4602 507 Pfam Protein kinase domain 44 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4602 507 ProSiteProfiles Protein kinase domain profile. 42 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4602 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Psa6g4602 507 SUPERFAMILY Protein kinase-like (PK-like) 39 375 IPR011009 -
Psa6g4602 507 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 10 503 - -
Psa6g4602 507 ProSitePatterns Protein kinases ATP-binding region signature. 48 75 IPR017441 GO:0005524
Psa6g4602 507 Gene3D Phosphorylase Kinase; domain 1 43 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4602 Psa-Chr6 399988454 399991875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4602 37 303 EF-hand Containing Proteins AT5G19360 51.311 5.50e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa6g4602 Pkinase 7.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4602 - - gmx:100776088 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4602 6 399988454 399991875 Psa6g4602 6 399988454 399991875 ECH