Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4527 ATGGAGTTCATATGGTTATGTGGCATTTTTGTTGCTATGTTAGCAACACTTTGCCTCTTGTTGCTATTGATACTAACACTTTCTTGGTGGGTTTTTCCTATCCAAATCCACAAGAAGCTTAAAAGAAATGGGTTTCAAGGGCCAACTCCAAGCTTTCCACTTGGAAACATTGAAGAGATGAAAAGAAAAAATATCATAAAATCTTCACTTGAATCCTCAAATCTCACACATGATATTCACTCGAAAGTTTTTCCCTACTTTTCTTCTTGGCAAAAATCATACGGTAAAGTATTCGTGTATTGGCTAGGGACGGAGCCATTTTTATACATTGCAGATGCAGAATTCTTGAAGAAAATGTCAACAGAAGTGATGGCAAAGAGATGGGGAAAACCTAATGTTTTTAGAAATGATAGAGATCCCATGTTTGGAAGTGGTTTGGTTATGGTAGAGGGAAATGATTGGGTTCGTCATCGTCACATTGTTGCACCAGCATTCAATCCTCTTAACCTCAAGGTGATGGCAAGCATGATGGTTGAGTCTACAAATCAAATGATGAATAAATGGACTAACCAAATAAACTTTGGCAACCATGAAATTGATGTGGAGAAAGAAGTCATAACAATAGCTGGAGAGATTATAGCAAAAACAAGTTTTGGTGTGGAAGATGAAAATGCTAAAGAGGTTTTTAATAAATTAAGAGCCTTACAAATGACTCTCTTTAATACCACTCGATATGTAGGTGTTCCCTTTGGCAAGTTATTTAATGTCCAAAAAAACTTGGAGGCTAAGAAACTTGGCAAAGAAATAGACAAGCTCTTGTTGTCAATTGTAGAAGCTAGGAAAAGTTCAACTAAAATGAATTCTAAAAAGGATTTATTAGGGTTGTTGCTACAAGAAAATAATCATGTTGACCGATTGGGGAAGACATTAACATCAAGAGAAGTGGTTGATGAATGCAAAACTTTCTTTTTTGGTGGACATGAAACAACAGCACTTGCTATCACATGGACTTTGTTGCTTCTAGCCATGCATGAAGATTGGCAGAATCAATTAAGAGAAGAGATTAAAGAAGTGGTGGAAAATAATGAGATTGATATCACTACGCTTGCTAGTTTGAAGAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTATACCCACCAGCACCAAATGTGCAGAGACAAGCAAGAGAAGACATTCGAGTTGATGATGTAATAGTGCCTAACGGAACAAACATGTGGATCGATGTTGTAGCAATGCACCATGATCCTGAACTATGGGGAGAAGATGTGAATGAGTTCAAACCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAAACATAAAATGGGGTATTTGCCATTCGGATTTGGAGGGAGAATGTGTGTGGGTAGAAACTTGACATTTATGGAGTACAAGATAGTATTAACAATACTTCTCTCTAATTTTACTTTTAAGGTTTCTCCAAGTTACCAACATTCACCGGCCATCATGCTCTCCCTTAGGCCTACTCATGGACTTCCACTCATTGTTGAACCCCTTAATTAG 1551 0.3752 MEFIWLCGIFVAMLATLCLLLLLILTLSWWVFPIQIHKKLKRNGFQGPTPSFPLGNIEEMKRKNIIKSSLESSNLTHDIHSKVFPYFSSWQKSYGKVFVYWLGTEPFLYIADAEFLKKMSTEVMAKRWGKPNVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPLNLKVMASMMVESTNQMMNKWTNQINFGNHEIDVEKEVITIAGEIIAKTSFGVEDENAKEVFNKLRALQMTLFNTTRYVGVPFGKLFNVQKNLEAKKLGKEIDKLLLSIVEARKSSTKMNSKKDLLGLLLQENNHVDRLGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLREEIKEVVENNEIDITTLASLKKMKWVMNEVLRLYPPAPNVQRQAREDIRVDDVIVPNGTNMWIDVVAMHHDPELWGEDVNEFKPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTILLSNFTFKVSPSYQHSPAIMLSLRPTHGLPLIVEPLN* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4527 516 SUPERFAMILY Cytochrome P450 77 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 Pfam Cytochrome P450 81 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 510 - -
Psa6g4527 516 Gene3D Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4527 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Psa6g4527 516 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 5 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4527 Psa-Chr6 394810247 394813333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4527 1 515 Cytochrome P450 AT5G52400 59.501 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4527 - - gmx:100785284 838.95