Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4522 ATGGAGCTTCATTTACTGGAAACCGAATCTTCAAAAATGAGACAACAACGCTTTACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTGAGGATCTTCTACCAAAAGGCATTGCTTTCTGGCTGTTCAGCAGGAGGTTTAGCCACCTTTCACCATTGTGACAACTTCACTAAGTATTTGCCAACAAATGCTTCTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTCGATGAAAGAGATGTCAGTTTGAATCACACTATGAGGTACTTTTTCAAAAGTCTAGTTACATTGCAGGGAATAGAGCAGAACCTTAATGAAAACTGCACGAGTGCGCTTTCGGATCCAGACTTGTGCTTCTTTCCGCAATATGCGTTGAAATATATATCAACGCCGTATTTTATCTTGAACTCTGCCTATGATGTATTCCAATTTCATCATATATTGGCGCCACCTTCAGCTGATCCCCTCGGGTACTGGAGTCACTGCAGGGTGAACAAATCGGCATGCACACCAGCCCAAATTAATACATTGCAAGGTTTTAGGCTCAGCATGCTAGCAGCTTTGAAACCGTTCTACTTTTATTCGAAAAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATCGCAAGAAACATGGTTTGGAGACGATTCTCCTAGAATAAACAAAAAGACTATTCCCAGAAGCAGTTGGTGA 708 0.4096 MELHLLETESSKMRQQRFTSKGKRFGKPLLRIFYQKALLSGCSAGGLATFHHCDNFTKYLPTNASVKCLSDAGFFLDERDVSLNHTMRYFFKSLVTLQGIEQNLNENCTSALSDPDLCFFPQYALKYISTPYFILNSAYDVFQFHHILAPPSADPLGYWSHCRVNKSACTPAQINTLQGFRLSMLAALKPFYFYSKRGGMFINSCFAHCQSESQETWFGDDSPRINKKTIPRSSW* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4522 235 PANTHER NOTUM-RELATED 35 231 IPR004963 GO:0016787
Psa6g4522 235 Pfam Pectinacetylesterase 35 232 IPR004963 GO:0016787
Psa6g4522 235 PANTHER PECTIN ACETYLESTERASE 9 35 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4522 Psa-Chr6 394658654 394660536 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4522 35 233 Carbohydrate Esterase AT5G23870 65.000 1.17e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4522 K19882 - gmx:100802358 346.28