Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4518 ATGATCCAACCGGTTTCTGTTACGATGAACTTCGCCGTGGCTTTTGCATTGGTGTGTATAATCACGGTGGAGCCATGGCGCGTTAACTCACAAGAACAGAGGCTTCTAGTGAACATGACGATCGTTAAGAACGCACGTGATACTGGTGCTCTTTGTTTGGATGGTAGTTTACCGGCTTATCATTTGCACAGAGGTTATGGAGCAGGGGAGAATAACTGGCTTCTACAATTTGAGGGTGGTGGATGGTGCAATGACTTGCAATCATGCTTGGAGAGAGCACCAACTCGTAGGGGTTCAACAAAGCACATGAACAAGTTTGCTGTTTTCTCTGGTATTTTAAGCAATAATGCCACCCTTAATCCAGACTTTTACAATTGGAACCGGGTGAAACTGAGATACTGTGATGGAGCTTCATTTACTGGAAACCAAATCTTCAAAAATGGGACGACAACGCTTTACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTGAAGATCTTCTGCCAAAAGGTTTAGGAAAGGCATACAAGGCTTTGCTTTCTGGCTGCTCAGCAGGAGGTTTAGCCACTTTTCACCATTGTGACAACTTCGCCAAGTATTTGCCAACAAATGCTTCTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGATGGAAGAGATGTCAGTTTGAATCATACTATGAGATACTTCATCAAAAGTCTAGTTACATTGCAGGGGGTAGAGCAGAACCTTAACGAAAACTGCACGAGTGCACTTTCCTATCCAGACTTGTGCTTCTTTCCACAATATGCATTGAAATATATATCAACACCGTATTTTATCTTGAATTCTGCCTATGATATATTCCAGTTTCATCATATATTGGCGCCACCTTCAGCTGATCCCCTCGGGCACTGGAGGCACTGCAGGGTGAACAAATCGTCATGCACACCAGCCCAAATGAATACATTGCAAGGTTTTAGGCTCAGCATGCTAGCAGCTTTGAAACCGTTCTACTTTTATTCGAAAAGAGGGGGAATGTTCATAATAAGTACAAAACGAGTAACGGTTTCACTTAGCGTTCTTTGTACGTTTGGAGACGATTCTCCTAGAATAAACAAAAAGACTATTGCAGAAGCAGTTGGTGATTGGTATTTTAGTAGAAACAGAAGCAAGCAAATAGACCGTCCGTATCCATGTGATAATGATAAAACTTGTCATAACTTAATACCATAA 1218 0.4171 MIQPVSVTMNFAVAFALVCIITVEPWRVNSQEQRLLVNMTIVKNARDTGALCLDGSLPAYHLHRGYGAGENNWLLQFEGGGWCNDLQSCLERAPTRRGSTKHMNKFAVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGNQIFKNGTTTLYFKGQKIWEAIIEDLLPKGLGKAYKALLSGCSAGGLATFHHCDNFAKYLPTNASVKCLSDAGFFLDGRDVSLNHTMRYFIKSLVTLQGVEQNLNENCTSALSYPDLCFFPQYALKYISTPYFILNSAYDIFQFHHILAPPSADPLGHWRHCRVNKSSCTPAQMNTLQGFRLSMLAALKPFYFYSKRGGMFIISTKRVTVSLSVLCTFGDDSPRINKKTIAEAVGDWYFSRNRSKQIDRPYPCDNDKTCHNLIP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4518 405 Pfam Pectinacetylesterase 30 383 IPR004963 GO:0016787
Psa6g4518 405 PANTHER PECTIN ACETYLESTERASE 9 29 405 - -
Psa6g4518 405 PANTHER NOTUM-RELATED 29 405 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4518 Psa-Chr6 394460292 394468181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4518 9 405 Carbohydrate Esterase AT5G23870 61.905 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4518 K19882 - gmx:100802358 645.58