Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4498 ATGCCAGTTGCAAAACTTACTGCCTCAGAAATTCCAGGGTGGCCTGTGTTTTCTCCTGCGAAGGTTCAGATACATAAGTGTGACAAGTGTACCAAAGAGTTTTGCTCACCAATTAATTATAGAAGACATAAGCGTGTACACCATCGGTTGAAAAAGCTTGATAAGGACTCTAAGAAAAATAGGGAGTTTTTAGAGGCATATTGGGATAAGCTCTCTGTAGAAGAGGCTAAGGAAGTTGTGTCATTTAAGAATGTAATGCTGGAGGAGGTTCCAGGGTCTTCAGTTTTACAAGCTCTCTCAACTCTTAGAACACAACAAGGATTCTATTCTTTTCCACATGGTTACCTCAGAGCTGGTTTTGCCCTTTTGGATATTGTTCAATCCAGGCCTTCTAGTTTCCCTATATCTTCACAGAAGCTGTTCGATATTCTTGATGATTCCAGTGAAAAAACATTTTTGTGTGGAACAGCAGTGTCAATGCAAAGACATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTCGAACCGAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTAAAGGCATGGCTCGCCGACAAGGACGCTGAAGCATTGAGATGCCAGAAGCTGCTGGTGGAGGAGGAGGAAGCTGCTCAGAGAAGACAAGCCGAGATTTTGGAGAGAAAACGCCAGAAAAAGCTTAGGCAGAAAGAACAGAAGGCGCGAGGCCGACCTGAAAATGACACAGAAATTAAAAAGAGCATTAGCAGCACAGAAGAGAATGTATCACCAGAGGAAGCATCTTTGGCTGTATGTGACTTTGAAGCATATAGAGCAGATGTAGTTGCCGATCATGCTTCACCCCTTGTAACTTATCACTGCCCAGACACCAATGAATGTGTTGACGTGGATACAAAGTCAGGATTTCATTGTGACACTGATCAGAATGTGGAGCAGTGGACATCACAAAGGGATGCACAACCAGGTTATGATTGCGACACTGATCGGAATTTAGAGAGACAGACATCACAGAGACATAATCCTAGGCGGACAGCGGCTGCTAGACGGCAAGGGCTGCCTAAGTCACAACGTACTATTGCCAATGGTTTGTATGCAAGCCAGAACTCTCAAAAGTCAAAGTTTGGAGTCATTCCAAAATATGGAACCAACCGTGATCAGAGGGCAGCTCCTATAGTTAACGGTGGTAAAGTTTGGAGCCGGAAGCCTAAACCAGAAACAGATGCAGGGGTTATGAAAGCTAGGCTGCATAAAGAACCCGACAAAATTAAGAATCATGAGGTTTTGATAGGATCTGTATCTGTTACACTGGCCAATTGCAGCCAATCAGAGGGTAATCCTGTCACATCTCAAGCGGACATCATAGTAGAGAATTTGGCTGACCAAAATATTGCTCAGGAGAAGCCAATTAAACCTGACTCCTTTCAGGGAGGCAACAACCGATCAAGAGTTAAGCTTTGGAGACCGGTTAGCCTGCACGGAACTAAAAATCCGCTGCCACTTCAAAGTGTTGAGACAGAAATTGATGGAAAAGATGATCAAAGTAGTTTAAGGTCGTGTAATATAGATGGAGGTGATATTAGTTCTGGCAACAAATCTAATGTTGGGGATAAAGCAGATATAGAAAACGTTCAGTTTTCCAGTCATGCTGCAAAAGCCTTTCTCTCAGAAAGGTGGAAAGAAGCAATTTCATCACCTCACGTGGAGTTGGTTATTTCACCTGATTCCGAACTTCCTGGATTACAGGCGATCATGGAATGTGAGCCAGCACCGTGTCGATCTTCTAATTCGGATAAATGCAATGTTCTTGCAAATACAGAAAACTGGTTGCCTGCAACCTCTGGAGTTGCTAAATCGAAATCCAGAATCAAGTCGGAGAAGGGAATCAAAATAAAGTACATTCCAAAACTAAAGGCTGCATCATAA 1941 0.4312 MPVAKLTASEIPGWPVFSPAKVQIHKCDKCTKEFCSPINYRRHKRVHHRLKKLDKDSKKNREFLEAYWDKLSVEEAKEVVSFKNVMLEEVPGSSVLQALSTLRTQQGFYSFPHGYLRAGFALLDIVQSRPSSFPISSQKLFDILDDSSEKTFLCGTAVSMQRHVFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQRRQAEILERKRQKKLRQKEQKARGRPENDTEIKKSISSTEENVSPEEASLAVCDFEAYRADVVADHASPLVTYHCPDTNECVDVDTKSGFHCDTDQNVEQWTSQRDAQPGYDCDTDRNLERQTSQRHNPRRTAAARRQGLPKSQRTIANGLYASQNSQKSKFGVIPKYGTNRDQRAAPIVNGGKVWSRKPKPETDAGVMKARLHKEPDKIKNHEVLIGSVSVTLANCSQSEGNPVTSQADIIVENLADQNIAQEKPIKPDSFQGGNNRSRVKLWRPVSLHGTKNPLPLQSVETEIDGKDDQSSLRSCNIDGGDISSGNKSNVGDKADIENVQFSSHAAKAFLSERWKEAISSPHVELVISPDSELPGLQAIMECEPAPCRSSNSDKCNVLANTENWLPATSGVAKSKSRIKSEKGIKIKYIPKLKAAS* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4498 646 MobiDBLite consensus disorder prediction 319 363 - -
Psa6g4498 646 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 52 IPR013087 -
Psa6g4498 646 MobiDBLite consensus disorder prediction 328 345 - -
Psa6g4498 646 MobiDBLite consensus disorder prediction 238 254 - -
Psa6g4498 646 ProSitePatterns Zinc finger C2H2 type domain signature. 27 48 IPR013087 -
Psa6g4498 646 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 644 - -
Psa6g4498 646 MobiDBLite consensus disorder prediction 227 261 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4498 6 641 C2H2 Transcription Factor Family AT4G25610 39.724 4.58e-123 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa6g4498 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4498 - - cam:101491132 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4498 6 393504825 393512341 Psa6g4498 6 393504825 393512341 ECH