Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4491 ATGTCGTCACCGGGCTTCCCCGGCGGCGTCGGAGCCTCCGATTTCTACGGCAGAGCAGGTAACTTTTCCGGCAGATCTATCACACTTCCGTCCAACATGAACAATATGAACAACAATAACAATAATTTCTCAACCATGGCCACCACCACCACCCAGAATTATCATAACCCTTTCTACCGAACCCAACAACAACAACAACAACTTCCATCGATTTTCATCGACCCTTCTTCCCAAATCGTTCAAAACCGATCATCTACCATGATCAGAAATTACCTTGACCCTTCTTCCCAAATCGCACAACAACGTCATGCATCTAACCTCATCGGAAAACGTACCCTCGCTGAATTTCAAACCCACAACATCAACAACATCAACAAGACCAACAACCTCAGTACCCACAATACTGCTAACGCTCTTCTTTCCAACCTTGTATTTCGCTCTGTCAAACCTAGAAATTTTCAATACGGTTCTCCTCTTTCACCTCTTTCTCCTATGGATTTCTCAAATTCATCAAATTCATCAACCGATTTGGGCAACAATTCTTCTTGTTCTTCTTCTGCTATAGCTATGCTTCTTCGCTCGAATCCTGGTGCTCAAAACTCAACACCGGTGAATAATTCGATCCTCCAGAATACCCATTTTCAAAATCAAAATTCCAATTCTGCTGAGATTCAGACAACAATCACTGACCCAAATAAGAAAATGATGGATAATTACTTATTGGAGTTGGAAAAACAGCTCCTTGAAGACAATGACGAAGAAGGAGAACAAGATGGGAATTCTGTCACTACAAACAGTGAATGGTCTGAGACAATTCAGAATTTAATTAGTTTACAGCAAAACCCGATCCAGATACCAGTTTCATCACCGTCTTCATCCAACACTTCCCTGAATTCATCTTCTTCCTCGGTTGTTTTACCTTCGGGCTCTTTCAAGCAATGGTTAACAGAAGCTGCTACCGCGATTTCGGAAGGTAAAATCGATGCTGCATCGGAGATCCTTAATCGTTTGGCTCAGACACTAAAACTATCCGTGAGTTCTGATAGTAGATTAACTAATTATATGGTCTCAGCGCTCAAATCTCGCATGAATCATTTCGAAAATCCACCTCCGGTAGCGGAACTGTTCAGTAAAGAACATGCTGAGTCAACTCAGCTTATGTTCGATAATTCTCTGTGCTTTAAGGTCGCTTTCATGGCTGGCAACATCGCAATCATCGAAGCTGCATTCGATGAAACAACATCAGAGAGAACTAACAGTAACAACAATATGAAGAATATCTGTGTGGTGGATTTTGATATTGGTCATGGGAAAAGATACGTTAACCTTCTCCATGAGCTACACGCGCGTCTCAAAGGTTCACCGGCGACGTTGAAGATCACAGCTGTAGCAGATAACAGCAACGACGAGAGGTTGAAGATGGTGGAAGAGAATTTGAGTCAACAAGCTGAGAAATTGGGAATCGGTTTTGAATTCAAAGTGGTAACACTGAAAATCACCGAGTTAACTCGCGAGTCATTGGGTTACAGCTCAGAGGATATTCTTGCTGTCAACTTCGCGTTCAAGCTTTTCAGAATGCCAGATGAAAGCGTGTCAACTGAGAATCCACGCGACGAGCTTCTCAGGCGCGTGAAATCACTTGCCCCGCGTGTAGTAACTCTTCTGGAGCAAGAGCTGAATACAAACACAGCTCCATTTGTCGCACGTGTGGCTGAGTCGTTTTCCTATTACGGCGCGTTGCTTGACTCAATTGAGTCCACAATGGGGAAAGAGAGCTCGGAGCGAGTCAAGATTGAGGAGGGGCTGAGTCGGAAGATGGGTAACACGGTTGCTTGTGAAGGTAGGGATCGCGTGGAGCGCTGTGAAGTGTTTGGGAAGTGGCGTGCACGCATGAGTATGGCTGGGTTTAGTTTGAACCCGGTGAGTCAGAAAGTCGCTGAGTCGGTAAAAGCGCGACTCGCTCCAGGGAGCCGAGTTATTGTGAATGAAGAAAACGGTGGGGTTAGCTTTGGGTGGATGGGAAGAAAACTAACCGTCGCATCTGCTTGGCGTTAA 2055 0.4472 MSSPGFPGGVGASDFYGRAGNFSGRSITLPSNMNNMNNNNNNFSTMATTTTQNYHNPFYRTQQQQQQLPSIFIDPSSQIVQNRSSTMIRNYLDPSSQIAQQRHASNLIGKRTLAEFQTHNINNINKTNNLSTHNTANALLSNLVFRSVKPRNFQYGSPLSPLSPMDFSNSSNSSTDLGNNSSCSSSAIAMLLRSNPGAQNSTPVNNSILQNTHFQNQNSNSAEIQTTITDPNKKMMDNYLLELEKQLLEDNDEEGEQDGNSVTTNSEWSETIQNLISLQQNPIQIPVSSPSSSNTSLNSSSSSVVLPSGSFKQWLTEAATAISEGKIDAASEILNRLAQTLKLSVSSDSRLTNYMVSALKSRMNHFENPPPVAELFSKEHAESTQLMFDNSLCFKVAFMAGNIAIIEAAFDETTSERTNSNNNMKNICVVDFDIGHGKRYVNLLHELHARLKGSPATLKITAVADNSNDERLKMVEENLSQQAEKLGIGFEFKVVTLKITELTRESLGYSSEDILAVNFAFKLFRMPDESVSTENPRDELLRRVKSLAPRVVTLLEQELNTNTAPFVARVAESFSYYGALLDSIESTMGKESSERVKIEEGLSRKMGNTVACEGRDRVERCEVFGKWRARMSMAGFSLNPVSQKVAESVKARLAPGSRVIVNEENGGVSFGWMGRKLTVASAWR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4491 684 PANTHER SCARECROW-LIKE PROTEIN 8 101 683 IPR030013 -
Psa6g4491 684 Pfam GRAS domain family 312 684 IPR005202 -
Psa6g4491 684 ProSiteProfiles GRAS family profile. 302 684 IPR005202 -
Psa6g4491 684 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 101 683 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4491 Psa-Chr6 393127645 393130489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4491 12 684 GRAS Transcription Factor Family AT5G52510 43.857 8.42e-136 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa6g4491 GRAS 2.2e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4491 - - aip:107644872 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4491 6 393127645 393130489 Psa6g4491 6 393127645 393130489 ECH