Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4424 ATGGATTTACTTGAAGGCGTCGGAGAGAGTTCATCGCCACCGCGCTCATTTGGCGGTTACAGCAACCACGATATCAGGACCGACGTTTACAACCGATTGGTGGAAACCGGTCACGACGAAGCCATATCCAATCCTGATTTTCGCGAACAGCTTGAAGCTCACTTCAATCTCTTGCCTCCAAGTTACGGACTTGATGTTAATGTTGATAGAGCTGAAGATGTTTTAGTTCATCGGAAACTTCTTGATTTGGCAAGAGACCCCGATAAGCGCCCTGTTTACCATATACGCTTATTGGAGAATATTTCTACTAGGACAGATGGCGAAGATCAAGAAATTGTAAGTACTCATACTAGCCCTGAGTTATCTTCTCATACAACAAATGGGGGAGTCGTAGCATCTAATAAGAGGACAAGAGATCTTGCAACTGAGTTTGAGCCTTGCTCAAAGCTTGAGGACCTAAATTTGGATGTTATAAAGAACTCCAAGGAAACAAAAGAAAAATTTGTTACTGACAGCTTTTCTCAAAGCTCTGAGATCCGAGAGGCATTGGAATCATCTCTGGAAGCTTGGGGAAAGCATGAAAATTCAAGTGTCCCAGTTCATGAAATAATATTTTCTGCTGTTGACAAACCAAAGCTTTTAAGTCAGCTGTCCGCTTTGCTGTCTGATATTGGACTTAACATCCGTGAAGCACATGTATTTTCCACAACTGATGGCTACTCCCTCGATGTTTTTGTGGTAGATGGATGGCCACTAGAGGAAACTGATGGGTTGTATGCTGCAATGGAAAAAGCTGTAGAAAGGAGTGAGGGGTCATGGTCTCATTCTTCAAATTCTCATTCAGCTGTGGCGAAAGCATTAGCAGCGGAAGGAAAATCTGGAGACTGGGAAATAGACAGGAGGTCGTTAAAGATAGGAGAAAAAGTAGCATCTGGATCCTGTGGAGATTTGTATCACGGAATTTATCTCGGTGAAGATGTTGCTGTTAAGGTTTTGAAATCTGGGCAACTGAATGATGCCTTAGAAGATGAGTTTACGCAAGAAGTAGCAATTTTGAGGCCAGTGCATCATAAAAATGTTGTTCGTTTCATTGGTGCATGCACTAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGACTGGGGGAAATTTTGGAGTTGCTCGGTTCCTTATTCAGGGGGGAGTGATGACTGCAGAGACTGGAACTTATAGATGGATGGCACCAGAGGTCATAAACCACCAGCCTTATGATCAGAAGGCAGATGTATTCAGTTTTTCCATAGTACTATGGGAACTAGTGACAGCAAAGGTACCGTATGATACCATGACTCCACTACAAGCTGCTTTGGGTGTGAGACAGGGACTGCGGCCAGAACTTCCAAAGCATGGGCACCCTAAACTATTAGATTTGATGCAAAGATGTTGGGAAGCAATTCCAAGTACTCGTCCATCCTTCAATGAGATAAGAGTTGAACTTGAAAATCTTTTGCTAGAAGTGGAGAATAATTCAGAAGCTAACGGTGCTTAA 1530 0.4281 MDLLEGVGESSSPPRSFGGYSNHDIRTDVYNRLVETGHDEAISNPDFREQLEAHFNLLPPSYGLDVNVDRAEDVLVHRKLLDLARDPDKRPVYHIRLLENISTRTDGEDQEIVSTHTSPELSSHTTNGGVVASNKRTRDLATEFEPCSKLEDLNLDVIKNSKETKEKFVTDSFSQSSEIREALESSLEAWGKHENSSVPVHEIIFSAVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPLEETDGLYAAMEKAVERSEGSWSHSSNSHSAVAKALAAEGKSGDWEIDRRSLKIGEKVASGSCGDLYHGIYLGEDVAVKVLKSGQLNDALEDEFTQEVAILRPVHHKNVVRFIGACTKCPHLCIVTEYMTGGNFGVARFLIQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEAIPSTRPSFNEIRVELENLLLEVENNSEANGA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4424 509 MobiDBLite consensus disorder prediction 114 129 - -
Psa6g4424 509 SUPERFAMILY ACT-like 201 272 IPR045865 -
Psa6g4424 509 Pfam ACT domain 201 248 IPR002912 -
Psa6g4424 509 ProSiteProfiles ACT domain profile. 202 280 IPR002912 -
Psa6g4424 509 SUPERFAMILY Protein kinase-like (PK-like) 294 498 IPR011009 -
Psa6g4424 509 Pfam Protein kinase domain 305 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4424 509 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 384 503 - -
Psa6g4424 509 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 384 - -
Psa6g4424 509 Gene3D Phosphorylase Kinase; domain 1 290 377 - -
Psa6g4424 509 MobiDBLite consensus disorder prediction 1 20 - -
Psa6g4424 509 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 384 - -
Psa6g4424 509 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 384 503 - -
Psa6g4424 509 MobiDBLite consensus disorder prediction 106 129 - -
Psa6g4424 509 CDD STKc_MAP3K-like 309 489 - -
Psa6g4424 509 Gene3D Transferase(Phosphotransferase) domain 1 378 506 - -
Psa6g4424 509 Pfam Protein tyrosine and serine/threonine kinase 385 492 IPR001245 GO:0004672|GO:0006468
Psa6g4424 509 ProSiteProfiles Protein kinase domain profile. 214 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4424 Psa-Chr6 389463635 389481924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4424 24 500 MAP Kinase Kinase Kinase AT2G17700 40.876 6.17e-123 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa6g4424 PK_Tyr_Ser-Thr 1.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4424 - - gmx:100797987 764.992