Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4421 ATGGATCTGAACTTCATCGGAGCTACTCCTGCTACGGCGGAGAACCACCACCACACTTCCAATTGTGCTAACACCATGGAGTTGGACGAAATGTTGGATAACTTGCTTCAGCGTGATCTTAGTGAGTTTGACTTCAGCCTCTTTGACATTCCATTACCGCTTTCTTCACACAAGCCGGTAACAGGTGGGATGCCTATTGATCCGGTTCCTGCACCTGCACAGCCGCCACAGTTTCAGAGCTTCTCTGAGGTATCTGATAATGTCAATTTGATAAAAACTAAGAGTGCCGTAGCTGCATATGGCAGAAACCACGGTGGCGAGACTGTATTAGGCCACCGTGTTTGTCTTGGCAGCGGGTCCTCAGCACCATCGTCTTATAAGAAGAGGACGGTTATACCCCCAGAAGAGCTTGCGGAACTTGAAATTTCTGATCCCAGAAAAGCACAGAGGATCATTGCTAATAGGGTTTCTGCTCAAAAATCCAAGGAGAAGAAAAGGAAATATGAAAAAGAGTTGAAAAAAAGAGTTGAGTTACTTAAAATTAAAGCTGATAATGTGACTGCTGAGCGCTTGACGGCGATGAATGAAGCTATGCAATTAGCTGCTGAGCACAAGAGGATCAAAGACCTGATACAGTCTACTTTACAGCATCAAGAAAAGCAAAGAGCTGTCATTAAATTGATGAAGGATCAAGCAAATATCCTTGAGATGCAAATTCATGAAATGAATACAGCAATGGCTGATTTATCTTTTGGTGAACCAGTCTCTCAATCCCAGCAAGAACTCTACACACCGCCGCAGCCGCCTCTAGTTCCTCCTCCACAATCTCCCTTTGGCGACCCTTTACTTCCTTCTCCACCATCTTCCTTTGGCGAGGCGTTAGCTCCTCCTCCGCTGTCTTCCTTTGGCGAGCCGTTCGCTCCTCCTCTGCTATCTCCCTTTGGCGAGGCATTAGTTCTTCTGTCATCTCCCTTTGGGGAGCCTTTTCGTGATCATTTTATTGGCACCAACTTTTCAAACTACAGTCCATGGAACTAG 1038 0.4595 MDLNFIGATPATAENHHHTSNCANTMELDEMLDNLLQRDLSEFDFSLFDIPLPLSSHKPVTGGMPIDPVPAPAQPPQFQSFSEVSDNVNLIKTKSAVAAYGRNHGGETVLGHRVCLGSGSSAPSSYKKRTVIPPEELAELEISDPRKAQRIIANRVSAQKSKEKKRKYEKELKKRVELLKIKADNVTAERLTAMNEAMQLAAEHKRIKDLIQSTLQHQEKQRAVIKLMKDQANILEMQIHEMNTAMADLSFGEPVSQSQQELYTPPQPPLVPPPQSPFGDPLLPSPPSSFGEALAPPPLSSFGEPFAPPLLSPFGEALVLLSSPFGEPFRDHFIGTNFSNYSPWN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4421 345 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 12 260 - -
Psa6g4421 345 Coils Coil 169 189 - -
Psa6g4421 345 SUPERFAMILY Leucine zipper domain 146 197 IPR046347 GO:0003700|GO:0006355
Psa6g4421 345 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 12 260 - -
Psa6g4421 345 SMART brlzneu 142 206 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4421 Psa-Chr6 389332855 389334787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4421 98 247 bZIP Transcription Factor Family AT2G40620 31.788 1.85e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4421 - K04512 mtr:MTR_1g099030 154.066