Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4417 ATGCCTACATGGTGGGGAAAATCATCATCAAAAGAAACCAGGAAGAAAGCAGGTAAGGAAAGTATTATTGACACATTGCACCGAAAATTTAAATTTCCATCTGAGGGTAAATTAAGCACTAGATCAGGAGGATCTCGTAGACGAAGCAATGACACAATCTCAGAGAAAGGGGATCGTTCTCCATCCGAATCAAGATCGCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGGCCACATGCTCAACCACTTCCGCTCCCTGGTCTGCACCCTTCAAGTGTAGGTCGAGTGGATTCTGAAATTAGTATATCAGCAAAATCAAGACTGGAAAAGTCCTCCAAATCCTTATTGTTTCTTCCACTTCCGAAACCTGCGTGCATACGCTGCGGGTCAAATCCTGCAGATTTAGATGGAGATATGGTCAACACTTCAGTCTTCAGTGATTGCTCTGCTGATAGTGACGAGCCAGCAGACTCACGCAATCGTAGTCCTCTGGCAACTGACTCCGAAACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCTTGATGCTCAAGGATCAACCGTCTGCTGTTGCCCAACTGAATTCGAGAGAAGTGAAAACACCGACAAACATTTTAAGTAATCACACACCTTCTACTTCACCTAAGCGAAGGCCTTTACGACACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGTCTTTTATAGTGGTCCCGACAGTTCCTTGTCAAGTCCATCAAGAAGTCCGCTGAGGGCATTTGGTACAGATCAGGTGTTGAATTCTGCATTTTGGGCTGGAAAGCCATATCCAGAGATCAATTTCGTCGGATCTGGCCACTGCTCTAGTCCAGGTTCCGGTCACAATTCGGGGCATAATTCAATGGGAGGGGACATGTCGGGACCATTATTTTGGCAACCAAGTAGGGGTAGCCCTGAGTATTCTCCGGTACCTAGTCCTAGAATGACTAGCCCTGGTCCTAGCTCAAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCAGCGGGAACACCGACTGAATCACAAACAGGGTGGGTTGATGAGGGAAAACAACAGAGTCACCGTTTGCCTCTCCCTCCTTTAACAGTTACCAATACCTCGCCGTTCTCTCATTCTAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCAGATAGTCCAATGAGCTCTGGTTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACGTTTGGACATGTCTATATTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTATGTTTTCAGATGATGCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAATTCATTTGTTGAGCCGTTTAAGACATCCAAATATTGTGCAGTATTATGGTTCTGAAAAAGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTTCATAGGGACATCAAAGGAGCAAACATACTGGTAGATCCAAATGGTCGGGTCAAGGTTGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATACTGTCCTTTGTCGTTCAAAGGAAGTCCTTATTGGATGGCTCCCGAGGTTATAAAAAATTCCAAGGAATGCAGCCTTGGTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGTCTCAATATGAAGGGGTTGCTGCCATGTTCAAAATTGGTAACAGCAAGGAGCTCCCAACAATCCCGGAACATCTTTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTACAACGTAATCCACGTGATCGCCCTTCAGCAAGTGAATTATTGGACCACCCTTTTGTAAAAGGTGCTGCACCTTTGGAAAGACCTATCATGGTTCCTGAAGCTTCAGACCCTATTTCTGGAATTACACATGGGACAAAAGCTCTGGGCATTGGACAAGGAAGAAATCTGTCTGCTTTGGATACAGATAAACTCTTAATTCATTCTTCCAGGGTTTTGAAAAGTAACCCTAATGAAAGTGAAAACCACATTCAAAGGAATATATCTTGCCCAGTTTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACATCAGAGAAGTGGTAGATTGTCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCACTGGCGGCGGCAGTGGTGCCATTCCATTCAGTAATCACTTAAAACAGTCGGTTTACTTTCAAGAGTGTCTTGGAAGCATGCCGAAATCCTCAAACTACATTAACAGCTCCTCTCATCATGACTCAAATATTGACATTTTTCGAGGAATGCAAATCGGGTCTCACATTAAATCAGAACTTGTCTCCTCCGAAAACGATGCTCTCACTAAGCAGTTTGTAAGGTCTCCTCATCCAGAGCCATATGACTTTCAGTCGGTCTTGGCTGATCGCGTTGGCCGGCAGCTGCTGGGAGATCATGTTAAGATTAACCCATCATTTGATCCAAATCCCAGCTCGTCGTTGCTCAACCGAACAAATGGCTTATGA 2697 0.4431 MPTWWGKSSSKETRKKAGKESIIDTLHRKFKFPSEGKLSTRSGGSRRRSNDTISEKGDRSPSESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSVGRVDSEISISAKSRLEKSSKSLLFLPLPKPACIRCGSNPADLDGDMVNTSVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLMLKDQPSAVAQLNSREVKTPTNILSNHTPSTSPKRRPLRHHVPNLQVPPHGVFYSGPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEINFVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAAGTPTESQTGWVDEGKQQSHRLPLPPLTVTNTSPFSHSNSAATSPSMPRSPARADSPMSSGSRWKKGKLLGRGTFGHVYIGFNSESGEMCAMKEVTMFSDDAKSMESAKQLMQEIHLLSRLRHPNIVQYYGSEKVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKVADFGMAKHITGQYCPLSFKGSPYWMAPEVIKNSKECSLGVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPEHLSNEGKDFVRKCLQRNPRDRPSASELLDHPFVKGAAPLERPIMVPEASDPISGITHGTKALGIGQGRNLSALDTDKLLIHSSRVLKSNPNESENHIQRNISCPVSPIGSPLLRSRSPHQRSGRLSPSPISSPRTASGASTPLTGGGSGAIPFSNHLKQSVYFQECLGSMPKSSNYINSSSHHDSNIDIFRGMQIGSHIKSELVSSENDALTKQFVRSPHPEPYDFQSVLADRVGRQLLGDHVKINPSFDPNPSSSLLNRTNGL* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4417 898 MobiDBLite consensus disorder prediction 748 776 - -
Psa6g4417 898 MobiDBLite consensus disorder prediction 165 218 - -
Psa6g4417 898 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4417 898 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4417 898 MobiDBLite consensus disorder prediction 152 223 - -
Psa6g4417 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 812 - -
Psa6g4417 898 MobiDBLite consensus disorder prediction 378 410 - -
Psa6g4417 898 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 812 - -
Psa6g4417 898 MobiDBLite consensus disorder prediction 9 62 - -
Psa6g4417 898 MobiDBLite consensus disorder prediction 1 98 - -
Psa6g4417 898 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Psa6g4417 898 CDD STKc_MEKK1_plant 410 667 - -
Psa6g4417 898 Pfam Protein kinase domain 412 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4417 898 Gene3D Transferase(Phosphotransferase) domain 1 408 684 - -
Psa6g4417 898 MobiDBLite consensus disorder prediction 378 404 - -
Psa6g4417 898 MobiDBLite consensus disorder prediction 314 337 - -
Psa6g4417 898 SUPERFAMILY Protein kinase-like (PK-like) 409 668 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4417 Psa-Chr6 389128502 389134188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4417 1 896 MAP Kinase Kinase Kinase AT1G63700 57.539 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa6g4417 Pkinase 1.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4417 K20717 - gmx:100797994 1457.58