Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4415 ATGGATGTGAATTTGTCCCAAGGTGGTGTTGGAAAATCTTTTGGTGGATTTGATTTACCTGGATCAATTCAGGTTCATCATCAAGCACATCATCCTCACACCATTCATCAGCATCAACCTCATCCGCATCCGTGTCAAGGTTCTTCACTGCATTCATCGGTTCATGATGGGTTTTCTCCCTTGCTGAACTGTGATCAAACTATTTCGATGACTGATTACGGTAAGGGAGAGAGAAGCAAAAACTCAACTAGTGATGAAGATGAGCGGAGTCTTAATGAGGATGGTTTTGACGGTCAACATGAAGGGGGGAGAGGTAAAAAGGGACCGCCATCGCCTTGGCAGCGTGTGAAGTGGACGGATAAGATGGTGAGGCTTATGATAACTGCTGTTTCTTATATAGGTGAGGATATAAGTTCTGATGGCGGTGGTGGTGGTGGTGGTGGAAGTGGAAGAAGGAAATTTACGGTTTTACAGAAAAAGGGTAAGTGGAAATCTGTATCGAAGGTTATGGCTGAAAGAGGTTATCATGTTTCGCCTCAACAATGCGAGGATAAGTTCAATGATCTCAATAAACGGTACAAAAAGCTTAATGATATGTTAGGGAGAGGGACTTCTTGTGAGGTTGTTGAAAATCCTTTACTTTTGGATGTAATTAATTTTCTTACCGAGAAAGAAAAGGACGATGTTCGGAAAATATTAAGCTCGAAACACTTGTTTTATGAAGAGATGTGTTCTTATCATAATGGTAATCGGTTGCATTTGCCGCATGATCCTGCATTGCAATGTTCGATGCAGTTAGCTCTCCGGAATAGGGATGATCATGATCATGATAATGACGATATCAGAATGTCCCATGTCGAGGATCATGATGACGATGAGCAAGATGTTGAGATTGAAGAACGCGATGATTTTAAAATGCACTGTGCTTCCCGTGGTGAGCGGTTAGGTGGAACGATGAAGAACTTGAAACAAATCCACAGCCAAGATGATGGTAGCAATAACACTCTTGGTAATTCTTCAAGTTGTCAAGATTATTTCAACCAAGGTTCGCATCCACGCGGACAAACGGTTCATTCTGACGGTAACCAAGTTTTACCTGAAAACACGAGAGCAGCATGGTTACAGAAGCAACGGGTTGACATTCGGCAAGTTCAATTAGAAGAGCAAAAGCTACAAATTCAGGCCGAGACGTTGGTATTAGAGAAACAAAGATTCAAGTGGCAGAGGTTTAGTAAAAAAAAGGACCAGGAGTTGGAGAAGATGAGTCTCGAAAACGAAAGAATGAAGCTTGAAAATGAACGCATGGCTTTAGAATTAAAGCGAAAGGAAATGCGCATCAGCTTTAACTAG 1350 0.4178 MDVNLSQGGVGKSFGGFDLPGSIQVHHQAHHPHTIHQHQPHPHPCQGSSLHSSVHDGFSPLLNCDQTISMTDYGKGERSKNSTSDEDERSLNEDGFDGQHEGGRGKKGPPSPWQRVKWTDKMVRLMITAVSYIGEDISSDGGGGGGGGSGRRKFTVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCEVVENPLLLDVINFLTEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQCSMQLALRNRDDHDHDNDDIRMSHVEDHDDDEQDVEIEERDDFKMHCASRGERLGGTMKNLKQIHSQDDGSNNTLGNSSSCQDYFNQGSHPRGQTVHSDGNQVLPENTRAAWLQKQRVDIRQVQLEEQKLQIQAETLVLEKQRFKWQRFSKKKDQELEKMSLENERMKLENERMALELKRKEMRISFN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4415 449 MobiDBLite consensus disorder prediction 78 104 - -
Psa6g4415 449 Coils Coil 411 447 - -
Psa6g4415 449 MobiDBLite consensus disorder prediction 72 116 - -
Psa6g4415 449 MobiDBLite consensus disorder prediction 26 53 - -
Psa6g4415 449 Coils Coil 374 401 - -
Psa6g4415 449 Gene3D - 118 195 - -
Psa6g4415 449 PANTHER F16F4.11 PROTEIN-RELATED 1 449 - -
Psa6g4415 449 Pfam Myb/SANT-like DNA-binding domain 115 246 IPR044822 -
Psa6g4415 449 PANTHER FACTOR, PUTATIVE-RELATED 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4415 Psa-Chr6 389087448 389089803 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa6g4415 Myb_DNA-bind_4 6.9e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4415 - - gmx:100812134 577.4